FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035131 through 18771 annotations produced 1 hits

Mth-like 9 (mthl9):

Annotation Number : CG17084
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035131
Gbrowse : chr3L:329819-332306 (-) // 100.0 //
Probeset : 1638616_at
Accessions : protein= NP_612029;, nucleotide= NM_138185;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0035131.
BDGP gene expression has embryonic in situ data for CG17084: 17 pix of staining in 9 body parts.
BioGrid reports that CG17084 interacts with CG5501 .
VDRC has 3 RNAi stocks for FBgn0035131 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	0.20	Down
Head	11 ± 0	4 of 4	0.90	None
Eye	13 ± 1	4 of 4	1.02	None
Thoracicoabdominal ganglion	5 ± 0	0 of 4	0.40	Down
Salivary gland	10 ± 5	0 of 4	0.75	None
Crop	39 ± 1	4 of 4	2.90	Up
Midgut	14 ± 2	2 of 4	1.00	None
Tubule	31 ± 3	4 of 4	2.30	Up
Hindgut	128 ± 8	4 of 4	9.40	Up
Heart	8 ± 1	3 of 4	0.60	None
Fat body	17 ± 3	4 of 4	1.26	None
Ovary	5 ± 0	3 of 4	0.40	Down
Testis	32 ± 3	4 of 4	2.40	Up
Male accessory glands	7 ± 4	1 of 4	0.60	None
Virgin spermatheca	29 ± 2	4 of 4	2.16	Up
Mated spermatheca	30 ± 4	4 of 4	2.25	Up
Adult carcass	13 ± 3	0 of 4	1.00	None
Larval CNS	9 ± 2	4 of 4	0.69	None
Larval Salivary gland	27 ± 2	4 of 4	2.00	Up
Larval midgut	174 ± 5	4 of 4	12.83	Up
Larval tubule	511 ± 17	4 of 4	37.60	Up
Larval hindgut	632 ± 22	4 of 4	46.54	Up
Larval fat body	12 ± 3	3 of 4	0.90	None
Larval trachea	302 ± 32	4 of 4	22.22	Up
Larval carcass	234 ± 3	4 of 4	17.21	Up
S2 cells (growing)	23 ± 3	4 of 4	1.75	Up
Whole fly	13 ± 1	4 of 4

Looking for FBgn0035131. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720