FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035145 through 18771 annotations produced 1 hits

Mediator complex subunit 14 (MED14):

Annotation Number : CG12031
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035145
Gbrowse : chr3L:593245-599242 (+) // 100.0 //
Probeset : 1640380_a_at
Accessions : protein= NP_612041; /// NP_728534;, nucleotide= NM_138197; /// NM_167835;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0016455 // RNA polymerase II transcription mediator
FlyMine data for FBgn0035145.
TRiP has 1 RNAi stocks for FBgn0035145 available for purchase.
VDRC has 2 RNAi stocks for FBgn0035145 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	196 ± 4	4 of 4	1.10	None
Head	134 ± 6	4 of 4	0.80	Down
Eye	101 ± 3	4 of 4	0.57	Down
Thoracicoabdominal ganglion	165 ± 3	4 of 4	0.90	None
Salivary gland	206 ± 10	4 of 4	1.16	None
Crop	147 ± 5	4 of 4	0.80	None
Midgut	121 ± 1	4 of 4	0.70	Down
Tubule	97 ± 2	4 of 4	0.50	Down
Hindgut	115 ± 4	4 of 4	0.60	Down
Heart	79 ± 4	4 of 4	0.45	Down
Fat body	119 ± 11	4 of 4	0.67	Down
Ovary	381 ± 8	4 of 4	2.10	Up
Testis	102 ± 6	4 of 4	0.60	Down
Male accessory glands	223 ± 11	4 of 4	1.30	Up
Virgin spermatheca	155 ± 10	4 of 4	0.87	None
Mated spermatheca	184 ± 7	4 of 4	1.04	None
Adult carcass	115 ± 5	4 of 4	0.70	Down
Larval CNS	357 ± 37	4 of 4	2.01	Up
Larval Salivary gland	348 ± 23	4 of 4	1.96	Up
Larval midgut	195 ± 13	4 of 4	1.10	None
Larval tubule	156 ± 7	4 of 4	0.90	None
Larval hindgut	184 ± 1	4 of 4	1.04	None
Larval fat body	139 ± 7	4 of 4	0.80	Down
Larval trachea	191 ± 21	4 of 4	1.08	None
Larval carcass	207 ± 7	4 of 4	1.17	None
S2 cells (growing)	201 ± 4	4 of 4	1.13	None
Whole fly	177 ± 11	4 of 4

Looking for FBgn0035145. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720