FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035181 through 18771 annotations produced 1 hits

(CG9205):

Annotation Number : CG9205
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035181
Gbrowse : chr3L:1034696-1036298 (+) // 100.0 //
Probeset : 1641178_s_at
Accessions : protein= NP_612075; /// NP_728564;, nucleotide= NM_138231; /// NM_167851;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0035181.
VDRC has 3 RNAi stocks for FBgn0035181 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	248 ± 4	4 of 4	1.30	Up
Head	216 ± 10	4 of 4	1.10	None
Eye	415 ± 22	4 of 4	2.15	Up
Thoracicoabdominal ganglion	331 ± 12	4 of 4	1.70	Up
Salivary gland	635 ± 10	4 of 4	3.29	Up
Crop	233 ± 7	4 of 4	1.20	Up
Midgut	248 ± 2	4 of 4	1.30	Up
Tubule	232 ± 2	4 of 4	1.20	Up
Hindgut	260 ± 2	4 of 4	1.30	Up
Heart	175 ± 2	4 of 4	0.91	Down
Fat body	227 ± 17	4 of 4	1.17	Up
Ovary	219 ± 3	4 of 4	1.10	Up
Testis	39 ± 2	4 of 4	0.20	Down
Male accessory glands	522 ± 9	4 of 4	2.70	Up
Virgin spermatheca	363 ± 12	4 of 4	1.88	Up
Mated spermatheca	365 ± 21	4 of 4	1.89	Up
Adult carcass	226 ± 4	4 of 4	1.20	Up
Larval CNS	366 ± 21	4 of 4	1.90	Up
Larval Salivary gland	466 ± 9	4 of 4	2.41	Up
Larval midgut	337 ± 10	4 of 4	1.74	Up
Larval tubule	300 ± 9	4 of 4	1.60	Up
Larval hindgut	299 ± 9	4 of 4	1.55	Up
Larval fat body	217 ± 15	4 of 4	1.10	None
Larval trachea	297 ± 30	4 of 4	1.54	Up
Larval carcass	213 ± 7	4 of 4	1.11	None
S2 cells (growing)	266 ± 12	4 of 4	1.38	Up
Whole fly	193 ± 4	4 of 4

Looking for FBgn0035181. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720