Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035260 through 18771 annotations produced 1 hits



(CG7991):

Annotation Number : CG7991
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035260
Gbrowse : chr3L:1712138-1714894 (+) // 100.0 //
Probeset : 1637888_at
Accessions : protein= NP_647649;, nucleotide= NM_139392;
FlyMine data for FBgn0035260.
VDRC has 3 RNAi stocks for FBgn0035260 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain27 ± 24 of 4 5.90Up
Head12 ± 13 of 4 2.60Up
Eye8 ± 22 of 4 1.91None
Thoracicoabdominal ganglion23 ± 32 of 4 5.00Up
Salivary gland25 ± 50 of 4 5.37Up
Crop11 ± 20 of 4 2.50None
Midgut7 ± 20 of 4 1.70None
Tubule11 ± 10 of 4 2.40Up
Hindgut7 ± 20 of 4 1.60None
Heart4 ± 10 of 4 1.05None
Fat body11 ± 50 of 4 2.44None
Ovary8 ± 20 of 4 1.90None
Testis7 ± 10 of 4 1.50None
Male accessory glands10 ± 20 of 4 2.30None
Virgin spermatheca7 ± 00 of 4 1.68None
Mated spermatheca12 ± 10 of 4 2.69Up
Adult carcass11 ± 40 of 4 2.40None
Larval CNS25 ± 34 of 4 5.39Up
Larval Salivary gland15 ± 20 of 4 3.33Up
Larval midgut11 ± 40 of 4 2.42None
Larval tubule8 ± 20 of 4 1.70None
Larval hindgut11 ± 10 of 4 2.48None
Larval fat body13 ± 10 of 4 2.80Up
Larval trachea10 ± 40 of 4 2.24None
Larval carcass10 ± 10 of 4 2.22None
S2 cells (growing)16 ± 01 of 4 3.62Up
Whole fly4 ± 20 of 4

Looking for FBgn0035260. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime