Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035270 through 18771 annotations produced 1 hits



(CG13933):

Annotation Number : CG13933
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035270
Gbrowse : chr3L:1771808-1775143 (-) // 100.0 //
Probeset : 1628791_at
Accessions : protein= NP_647658;, nucleotide= NM_139401;
FlyMine data for FBgn0035270.
BDGP gene expression has embryonic in situ data for CG13933: 11 pix of staining in 3 body parts.
TRiP has 1 RNAi stocks for FBgn0035270 available for purchase.
VDRC has 2 RNAi stocks for FBgn0035270 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain134 ± 64 of 4 2.60Up
Head58 ± 64 of 4 1.10None
Eye37 ± 34 of 4 0.74Down
Thoracicoabdominal ganglion104 ± 44 of 4 2.00Up
Salivary gland73 ± 74 of 4 1.43None
Crop89 ± 24 of 4 1.80Up
Midgut35 ± 24 of 4 0.70Down
Tubule59 ± 54 of 4 1.20None
Hindgut67 ± 24 of 4 1.30Up
Heart49 ± 54 of 4 0.96None
Fat body98 ± 74 of 4 1.93Up
Ovary121 ± 14 of 4 2.40Up
Testis34 ± 24 of 4 0.70Down
Male accessory glands65 ± 14 of 4 1.30Up
Virgin spermatheca48 ± 54 of 4 0.94None
Mated spermatheca48 ± 24 of 4 0.95None
Adult carcass57 ± 74 of 4 1.10None
Larval CNS79 ± 94 of 4 1.56Up
Larval Salivary gland73 ± 64 of 4 1.43Up
Larval midgut50 ± 54 of 4 0.99None
Larval tubule113 ± 64 of 4 2.20Up
Larval hindgut116 ± 104 of 4 2.27Up
Larval fat body43 ± 24 of 4 0.80None
Larval trachea39 ± 34 of 4 0.78Down
Larval carcass85 ± 94 of 4 1.67Up
S2 cells (growing)77 ± 04 of 4 1.52Up
Whole fly51 ± 24 of 4

Looking for FBgn0035270. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime