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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035283 through 18771 annotations produced 1 hits



(CG12024):

Annotation Number : CG12024
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035283
Gbrowse : chr3L:1857166-1859049 (+) // 100.0 //
Probeset : 1639052_a_at
Accessions : protein= NP_647670; /// NP_728683;, nucleotide= NM_139413; /// NM_167921;
FlyMine data for FBgn0035283.
BDGP gene expression has embryonic in situ data for CG12024: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0035283 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain530 ± 134 of 4 2.40Up
Head309 ± 104 of 4 1.40Up
Eye415 ± 114 of 4 1.89Up
Thoracicoabdominal ganglion545 ± 134 of 4 2.50Up
Salivary gland169 ± 84 of 4 0.77Down
Crop269 ± 24 of 4 1.20Up
Midgut47 ± 24 of 4 0.20Down
Tubule546 ± 194 of 4 2.50Up
Hindgut405 ± 54 of 4 1.80Up
Heart280 ± 74 of 4 1.27Up
Fat body462 ± 524 of 4 2.10Up
Ovary432 ± 74 of 4 2.00Up
Testis84 ± 14 of 4 0.40Down
Male accessory glands171 ± 84 of 4 0.80Down
Virgin spermatheca243 ± 254 of 4 1.10None
Mated spermatheca280 ± 214 of 4 1.27None
Adult carcass264 ± 114 of 4 1.20None
Larval CNS257 ± 134 of 4 1.17None
Larval Salivary gland233 ± 154 of 4 1.06None
Larval midgut43 ± 44 of 4 0.20Down
Larval tubule741 ± 214 of 4 3.40Up
Larval hindgut595 ± 244 of 4 2.70Up
Larval fat body539 ± 704 of 4 2.40Up
Larval trachea200 ± 124 of 4 0.91None
Larval carcass276 ± 524 of 4 1.25None
S2 cells (growing)91 ± 44 of 4 0.42Down
Whole fly220 ± 154 of 4

Looking for FBgn0035283. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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