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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035308 through 18771 annotations produced 1 hits



(CG15822):

Annotation Number : CG15822
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035308
Gbrowse : chr3L:2153200-2163860 (-) // 100.0 //
Probeset : 1633334_at
Accessions : protein= NP_001137872; /// NP_647693;, nucleotide= NM_001144400; /// NM_139436;
FlyMine data for FBgn0035308.
Homophila reports that CG15822 is a close match (1e-22) to human gene (NP_003938), a gene associated with .
VDRC has 1 RNAi stocks for FBgn0035308 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.10Down
Head28 ± 24 of 4 0.90None
Eye29 ± 34 of 4 0.93None
Thoracicoabdominal ganglion6 ± 00 of 4 0.20Down
Salivary gland960 ± 284 of 430.09Up
Crop22 ± 24 of 4 0.70Down
Midgut20 ± 24 of 4 0.60Down
Tubule9 ± 02 of 4 0.30Down
Hindgut432 ± 104 of 413.60Up
Heart4 ± 11 of 4 0.14Down
Fat body11 ± 24 of 4 0.36Down
Ovary23 ± 04 of 4 0.70Down
Testis42 ± 44 of 4 1.30None
Male accessory glands12 ± 02 of 4 0.40Down
Virgin spermatheca41 ± 34 of 4 1.29None
Mated spermatheca61 ± 34 of 4 1.93Up
Adult carcass18 ± 43 of 4 0.60None
Larval CNS32 ± 64 of 4 1.02None
Larval Salivary gland502 ± 364 of 415.73Up
Larval midgut51 ± 44 of 4 1.61Up
Larval tubule18 ± 14 of 4 0.60Down
Larval hindgut101 ± 34 of 4 3.19Up
Larval fat body5 ± 11 of 4 0.20Down
Larval trachea35 ± 94 of 4 1.10None
Larval carcass227 ± 114 of 4 7.12Up
S2 cells (growing)6 ± 13 of 4 0.21Down
Whole fly31 ± 14 of 4

Looking for FBgn0035308. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime