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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035311 through 18771 annotations produced 1 hits



():

Annotation Number : CG15821
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035311
Gbrowse : chr3L:2171776-2172773 (-) // 100.0 //
Probeset : 1638372_at
Accessions : protein= NP_647696;, nucleotide= NM_139439;
FlyMine data for FBgn0035311.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 0.70None
Head0 00 of 4 1.30None
Eye2 00 of 4 4.10None
Thoracicoabdominal ganglion1 00 of 4 2.30None
Salivary gland2 10 of 4 5.40None
Crop0 00 of 4 0.90None
Midgut1 00 of 4 3.10None
Tubule0 00 of 4 1.30None
Hindgut0 00 of 4 0.70None
Heart1 00 of 4 2.65None
Fat body0 00 of 4 1.05None
Ovary0 00 of 4 0.80None
Testis1 00 of 4 2.20None
Male accessory glands1 00 of 4 2.20None
Virgin spermatheca1 10 of 4 3.35None
Mated spermatheca0 00 of 4 1.25None
Adult carcass0 00 of 4 1.20None
Larval CNS0 00 of 4 1.10None
Larval Salivary gland0 00 of 4 1.05None
Larval midgut2 10 of 4 5.25None
Larval tubule1 00 of 4 3.30None
Larval hindgut0 00 of 4 1.15None
Larval fat body8 31 of 416.80None
Larval trachea0 00 of 4 0.95None
Larval carcass0 00 of 4 0.95None
S2 cells (growing)0 00 of 4 1.10None
Whole fly0 00 of 4

Looking for FBgn0035311. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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