FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035392 through 18771 annotations produced 1 hits

(CG1271):

Annotation Number : CG1271
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035392
Gbrowse : chr3L:3052513-3054907 (+) // 100.0 //
Probeset : 1623154_a_at
Accessions : protein= NP_647763; /// NP_728795; /// NP_728796; /// NP_995981;, nucleotide= NM_139506; /// NM_167973; /// NM_167974; /// NM_206259;
Interpro : "0004370 // glycerol kinase activity // inferred from sequence or structural similarity /// 0004370 // glycerol kinase a
FlyMine data for FBgn0035392.
Homophila reports that CG1271 is a close match (2e-27) to human gene GK (NP_000158), a gene associated with Glycerol kinase deficiency, 307030 (3).
BioGrid reports that CG1271 interacts with CG7483 CG3151 .
TRiP has 1 RNAi stocks for FBgn0035392 available for purchase.
VDRC has 2 RNAi stocks for FBgn0035392 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	58 ± 0	0 of 4	1.50	Up
Head	71 ± 3	1 of 4	1.80	Up
Eye	78 ± 6	4 of 4	1.97	Up
Thoracicoabdominal ganglion	61 ± 4	0 of 4	1.60	Up
Salivary gland	33 ± 3	0 of 4	0.83	None
Crop	44 ± 2	0 of 4	1.10	None
Midgut	80 ± 2	0 of 4	2.00	Up
Tubule	87 ± 9	1 of 4	2.20	Up
Hindgut	49 ± 1	0 of 4	1.20	Up
Heart	51 ± 3	4 of 4	1.31	Up
Fat body	80 ± 11	0 of 4	2.03	Up
Ovary	41 ± 1	0 of 4	1.00	None
Testis	90 ± 11	4 of 4	2.30	Up
Male accessory glands	26 ± 1	0 of 4	0.70	Down
Virgin spermatheca	96 ± 7	4 of 4	2.43	Up
Mated spermatheca	65 ± 5	2 of 4	1.64	Up
Adult carcass	60 ± 3	0 of 4	1.50	Up
Larval CNS	44 ± 1	3 of 4	1.12	Up
Larval Salivary gland	44 ± 5	0 of 4	1.12	None
Larval midgut	81 ± 8	0 of 4	2.04	Up
Larval tubule	59 ± 4	0 of 4	1.50	Up
Larval hindgut	26 ± 2	0 of 4	0.68	Down
Larval fat body	70 ± 2	0 of 4	1.80	Up
Larval trachea	30 ± 4	4 of 4	0.78	Down
Larval carcass	29 ± 5	0 of 4	0.74	None
S2 cells (growing)	17 ± 0	0 of 4	0.44	Down
Whole fly	39 ± 1	0 of 4

Looking for FBgn0035392. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720