FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035397 through 18771 annotations produced 1 hits

polyA-nuclease related (CG11486):

Annotation Number : CG11486
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035397
Gbrowse : chr3L:3071127-3088674 (+) // 100.0 //
Probeset : 1626332_s_at
Accessions : protein= NP_001097486; /// NP_001097487; /// NP_001097488; /// NP_647767; /// NP_728797; /// NP_728798; /// NP_728799; /// NP_728800; /// NP_728801; /// NP_728802; /// NP_728804; /// NP_728805; /// NP_728806; /// NP_995982; /// NP_995983;, nucleotide= NM_001104016; /// NM_001104017; /// NM_001104018; /// NM_139510; /// NM_167975; /// NM_167976; /// NM_167977; /// NM_167978; /// NM_167979; /// NM_167980; /// NM_167982; /// NM_167983; /// NM_167984; /// NM_206260; /// NM_206261;
Interpro : 0004672 // protein kinase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred fro
FlyMine data for FBgn0035397.
BDGP gene expression has embryonic in situ data for CG11486: 6 pix of staining in 1 body parts.
BioGrid reports that CG11486 interacts with CG14641 CG6337 CG8023 CG8232 CG8322 CG8924 CG11498 CG12548 CG1307 CG13090 CG14226 CG1467 CG1478 CG15124 CG15218 CG1871 CG2678 CG30503 CG3187 CG3225 CG33152 CG3510 CG3629 CG3668 CG3981 CG4303 CG5016 CG5461 CG7111 CG7386 CG7392 CG7600 CG7824 CG7849 CG9426 CG9986 Dmel CR31696 .
TRiP has 1 RNAi stocks for FBgn0035397 available for purchase.
VDRC has 3 RNAi stocks for FBgn0035397 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	397 ± 9	4 of 4	1.60	Up
Head	173 ± 6	4 of 4	0.70	Down
Eye	415 ± 13	4 of 4	1.66	Up
Thoracicoabdominal ganglion	419 ± 12	4 of 4	1.70	Up
Salivary gland	634 ± 16	4 of 4	2.54	Up
Crop	340 ± 8	4 of 4	1.40	Up
Midgut	393 ± 10	4 of 4	1.60	Up
Tubule	472 ± 33	4 of 4	1.90	Up
Hindgut	255 ± 3	4 of 4	1.00	None
Heart	742 ± 20	4 of 4	2.97	Up
Fat body	173 ± 35	4 of 4	0.69	Down
Ovary	382 ± 3	4 of 4	1.50	Up
Testis	108 ± 6	4 of 4	0.40	Down
Male accessory glands	119 ± 9	4 of 4	0.50	Down
Virgin spermatheca	601 ± 32	4 of 4	2.40	Up
Mated spermatheca	688 ± 34	4 of 4	2.75	Up
Adult carcass	244 ± 4	4 of 4	1.00	None
Larval CNS	309 ± 12	4 of 4	1.23	Up
Larval Salivary gland	291 ± 10	4 of 4	1.16	None
Larval midgut	452 ± 32	4 of 4	1.81	Up
Larval tubule	205 ± 8	4 of 4	0.80	None
Larval hindgut	463 ± 35	4 of 4	1.85	Up
Larval fat body	225 ± 10	4 of 4	0.90	None
Larval trachea	1016 ± 143	4 of 4	4.06	Up
Larval carcass	453 ± 52	4 of 4	1.81	Up
S2 cells (growing)	132 ± 5	4 of 4	0.53	Down
Whole fly	250 ± 15	4 of 4

Looking for FBgn0035397. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720