FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035427 through 18771 annotations produced 2 hits

cracked (ckd):

Annotation Number : CG14959
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035427
Gbrowse : chr3L:3258154-3267752 (+) // 99.67 //
Probeset : 1641389_at
Accessions : protein= NP_995986;, nucleotide= NM_206264;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0008061 // chitin binding // inferred from electronic annotation
FlyMine data for FBgn0035427.
BioGrid reports that CG14959 interacts with CG3978 CG3978 .
VDRC has 2 RNAi stocks for FBgn0035427 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	1 of 4	0.10	Down
Head	23 ± 2	4 of 4	1.00	None
Eye	20 ± 3	4 of 4	0.92	None
Thoracicoabdominal ganglion	13 ± 0	4 of 4	0.60	Down
Salivary gland	13 ± 2	0 of 4	0.59	Down
Crop	19 ± 1	3 of 4	0.90	None
Midgut	3 ± 0	0 of 4	0.10	Down
Tubule	6 ± 1	0 of 4	0.30	Down
Hindgut	20 ± 1	4 of 4	0.90	None
Heart	4 ± 1	1 of 4	0.21	Down
Fat body	16 ± 6	3 of 4	0.74	None
Ovary	13 ± 1	4 of 4	0.60	Down
Testis	6 ± 0	3 of 4	0.30	Down
Male accessory glands	6 ± 2	0 of 4	0.30	Down
Virgin spermatheca	48 ± 2	4 of 4	2.13	Up
Mated spermatheca	69 ± 6	4 of 4	3.08	Up
Adult carcass	19 ± 1	2 of 4	0.80	None
Larval CNS	13 ± 3	4 of 4	0.59	Down
Larval Salivary gland	15 ± 3	3 of 4	0.69	None
Larval midgut	10 ± 2	2 of 4	0.45	Down
Larval tubule	3 ± 1	0 of 4	0.20	Down
Larval hindgut	257 ± 20	4 of 4	11.42	Up
Larval fat body	7 ± 1	0 of 4	0.30	Down
Larval trachea	529 ± 76	4 of 4	23.45	Up
Larval carcass	2746 ± 155	4 of 4	121.67	Up
S2 cells (growing)	2 ± 0	0 of 4	0.11	Down
Whole fly	22 ± 2	4 of 4

cracked (ckd):

Annotation Number : CG14959
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035427
Gbrowse : chr3L:3258154-3267752 (+) // 99.63 //
Probeset : 1625326_a_at
Accessions : protein= NP_995986;, nucleotide= NM_206264;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0008061 // chitin binding // inferred from electronic annotation
FlyMine data for FBgn0035427.
BioGrid reports that CG14959 interacts with CG3978 CG3978 .
VDRC has 2 RNAi stocks for FBgn0035427 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.20	Down
Head	19 ± 2	4 of 4	0.90	None
Eye	15 ± 0	4 of 4	0.77	None
Thoracicoabdominal ganglion	13 ± 1	4 of 4	0.70	Down
Salivary gland	7 ± 2	0 of 4	0.38	Down
Crop	15 ± 1	4 of 4	0.70	None
Midgut	3 ± 1	0 of 4	0.20	Down
Tubule	7 ± 0	0 of 4	0.30	Down
Hindgut	17 ± 1	4 of 4	0.80	None
Heart	5 ± 1	1 of 4	0.24	Down
Fat body	14 ± 4	3 of 4	0.70	None
Ovary	15 ± 0	4 of 4	0.80	None
Testis	8 ± 1	1 of 4	0.40	Down
Male accessory glands	10 ± 2	0 of 4	0.50	Down
Virgin spermatheca	40 ± 2	4 of 4	1.95	Up
Mated spermatheca	43 ± 2	4 of 4	2.09	Up
Adult carcass	17 ± 3	1 of 4	0.90	None
Larval CNS	7 ± 1	3 of 4	0.37	Down
Larval Salivary gland	11 ± 1	0 of 4	0.57	Down
Larval midgut	11 ± 2	4 of 4	0.57	Down
Larval tubule	4 ± 1	0 of 4	0.20	Down
Larval hindgut	140 ± 13	4 of 4	6.79	Up
Larval fat body	6 ± 1	0 of 4	0.30	Down
Larval trachea	260 ± 32	4 of 4	12.64	Up
Larval carcass	1859 ± 93	4 of 4	90.03	Up
S2 cells (growing)	3 ± 1	0 of 4	0.15	Down
Whole fly	20 ± 1	4 of 4

Looking for FBgn0035427. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720