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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035434 through 18771 annotations produced 1 hits



Drosomycin B (dro5):

Annotation Number : CG10812
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035434
Gbrowse : chr3L:3316808-3317147 (+) // 100.0 //
Probeset : 1627327_at
Accessions : protein= NP_647803;, nucleotide= NM_139546;
FlyMine data for FBgn0035434.
VDRC has 2 RNAi stocks for FBgn0035434 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain78 ± 54 of 4 0.10Down
Head4464 ± 1844 of 4 5.00Up
Eye2532 ± 2994 of 4 2.83Up
Thoracicoabdominal ganglion34 ± 104 of 4 0.00Down
Salivary gland11 ± 30 of 4 0.01Down
Crop7 ± 30 of 4 0.00Down
Midgut15 ± 20 of 4 0.00Down
Tubule6 ± 00 of 4 0.00Down
Hindgut11 ± 20 of 4 0.00Down
Heart23 ± 34 of 4 0.03Down
Fat body9 ± 50 of 4 0.01Down
Ovary7 ± 10 of 4 0.00Down
Testis29 ± 34 of 4 0.00Down
Male accessory glands9 ± 10 of 4 0.00Down
Virgin spermatheca20 ± 63 of 4 0.02Down
Mated spermatheca9 ± 00 of 4 0.01Down
Adult carcass2638 ± 1804 of 4 2.90Up
Larval CNS9 ± 31 of 4 0.01Down
Larval Salivary gland2 ± 10 of 4 0.00Down
Larval midgut20 ± 24 of 4 0.02Down
Larval tubule3 ± 10 of 4 0.00Down
Larval hindgut17 ± 51 of 4 0.02Down
Larval fat body1424 ± 2794 of 4 1.60None
Larval trachea36 ± 591 of 4 0.04Down
Larval carcass907 ± 5634 of 4 1.01None
S2 cells (growing)6 ± 20 of 4 0.01Down
Whole fly896 ± 294 of 4

Looking for FBgn0035434. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime