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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035476 through 18771 annotations produced 1 hits



(CG12766):

Annotation Number : CG12766
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035476
Gbrowse : chr3L:3938694-3940084 (-) // 100.0 //
Probeset : 1635410_at
Accessions : protein= NP_647839;, nucleotide= NM_139582;
Interpro : 0004032 // aldehyde reductase activity // inferred from sequence or structural similarity /// 0004032 // aldehyde reduct
FlyMine data for FBgn0035476.
Homophila reports that CG12766 is a close match (1e-65) to human gene (NP_005980), a gene associated with .
BioGrid reports that CG12766 interacts with CG13369 CG15611 CG2101 CG31612 CG40444 CG6665 CG9965 CG2045 CG30427 CG5282 CG7981 CG9456 .
VDRC has 3 RNAi stocks for FBgn0035476 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain9 ± 02 of 4 0.20Down
Head31 ± 44 of 4 0.50Down
Eye18 ± 32 of 4 0.32Down
Thoracicoabdominal ganglion12 ± 12 of 4 0.20Down
Salivary gland178 ± 84 of 4 3.08Up
Crop18 ± 12 of 4 0.30Down
Midgut1230 ± 594 of 421.20Up
Tubule90 ± 184 of 4 1.60None
Hindgut41 ± 24 of 4 0.70Down
Heart30 ± 44 of 4 0.52Down
Fat body64 ± 124 of 4 1.11None
Ovary6 ± 00 of 4 0.10Down
Testis13 ± 04 of 4 0.20Down
Male accessory glands31 ± 13 of 4 0.50Down
Virgin spermatheca57 ± 94 of 4 0.98None
Mated spermatheca38 ± 44 of 4 0.66Down
Adult carcass49 ± 44 of 4 0.90None
Larval CNS8 ± 43 of 4 0.15Down
Larval Salivary gland8 ± 20 of 4 0.14Down
Larval midgut84 ± 34 of 4 1.46Up
Larval tubule5 ± 20 of 4 0.10Down
Larval hindgut8 ± 20 of 4 0.15Down
Larval fat body8 ± 20 of 4 0.10Down
Larval trachea8 ± 20 of 4 0.14Down
Larval carcass7 ± 30 of 4 0.14Down
S2 cells (growing)11 ± 10 of 4 0.19Down
Whole fly58 ± 34 of 4

Looking for FBgn0035476. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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