Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035504 through 18771 annotations produced 1 hits



tipE homolog 4 (Teh4):

Annotation Number : CG15003
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035504
Gbrowse : chr3L:4175388-4177643 (-) // 100.0 //
Probeset : 1625158_at
Accessions : protein= NP_647866;, nucleotide= NM_139609;
Pathway : 0016021 // integral to membrane // not recorded
Interpro : 0005509 // calcium ion binding // inferred from electronic annotation
FlyMine data for FBgn0035504.
BioGrid reports that CG15003 interacts with CG2865 CG4753 .
VDRC has 2 RNAi stocks for FBgn0035504 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain82 ± 34 of 412.60Up
Head21 ± 24 of 4 3.30Up
Eye48 ± 34 of 4 7.49Up
Thoracicoabdominal ganglion93 ± 94 of 414.40Up
Salivary gland14 ± 31 of 4 2.21None
Crop4 ± 10 of 4 0.60None
Midgut1 ± 00 of 4 0.20None
Tubule3 ± 00 of 4 0.50Down
Hindgut2 ± 10 of 4 0.30None
Heart2 ± 11 of 4 0.38None
Fat body4 ± 30 of 4 0.70None
Ovary1 ± 00 of 4 0.30None
Testis4 ± 02 of 4 0.70None
Male accessory glands3 ± 10 of 4 0.50None
Virgin spermatheca3 ± 00 of 4 0.49None
Mated spermatheca4 ± 10 of 4 0.64None
Adult carcass7 ± 10 of 4 1.10None
Larval CNS89 ± 164 of 413.67Up
Larval Salivary gland3 ± 10 of 4 0.56None
Larval midgut0 ± 00 of 4 0.13None
Larval tubule1 ± 00 of 4 0.20None
Larval hindgut2 ± 10 of 4 0.36None
Larval fat body3 ± 10 of 4 0.60None
Larval trachea1 ± 10 of 4 0.30None
Larval carcass0 ± 00 of 4 0.14None
S2 cells (growing)5 ± 00 of 4 0.81None
Whole fly6 ± 20 of 4

Looking for FBgn0035504. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime