FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035533 through 18771 annotations produced 1 hits

Cip4 (Cip4):

Annotation Number : CG15015
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035533
Gbrowse : chr3L:4323533-4364120 (-) // 100.0 //
Probeset : 1631119_at
Accessions : protein= NP_001097501; /// NP_647893;, nucleotide= NM_001104031; /// NM_139636;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred
FlyMine data for FBgn0035533.
BioGrid reports that CG15015 interacts with CG1520 .
TRiP has 1 RNAi stocks for FBgn0035533 available for purchase.
VDRC has 2 RNAi stocks for FBgn0035533 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	266 ± 4	4 of 4	1.60	Up
Head	114 ± 16	4 of 4	0.70	Down
Eye	166 ± 9	4 of 4	0.98	None
Thoracicoabdominal ganglion	237 ± 27	4 of 4	1.40	None
Salivary gland	191 ± 7	4 of 4	1.12	None
Crop	333 ± 19	4 of 4	2.00	Up
Midgut	167 ± 8	4 of 4	1.00	None
Tubule	79 ± 9	4 of 4	0.50	Down
Hindgut	176 ± 4	4 of 4	1.00	None
Heart	71 ± 6	4 of 4	0.42	Down
Fat body	52 ± 8	4 of 4	0.31	Down
Ovary	465 ± 7	4 of 4	2.70	Up
Testis	74 ± 2	4 of 4	0.40	Down
Male accessory glands	82 ± 5	4 of 4	0.50	Down
Virgin spermatheca	25 ± 1	4 of 4	0.15	Down
Mated spermatheca	40 ± 4	4 of 4	0.24	Down
Adult carcass	91 ± 3	4 of 4	0.50	Down
Larval CNS	217 ± 11	4 of 4	1.28	Up
Larval Salivary gland	241 ± 14	4 of 4	1.42	Up
Larval midgut	143 ± 4	4 of 4	0.85	None
Larval tubule	122 ± 2	4 of 4	0.70	Down
Larval hindgut	148 ± 4	4 of 4	0.87	None
Larval fat body	71 ± 4	4 of 4	0.40	Down
Larval trachea	189 ± 9	4 of 4	1.11	None
Larval carcass	149 ± 11	4 of 4	0.88	None
S2 cells (growing)	324 ± 6	4 of 4	1.91	Up
Whole fly	170 ± 11	4 of 4

Looking for FBgn0035533. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720