FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035542 through 18771 annotations produced 1 hits

(CG11347):

Annotation Number : CG11347
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035542
Gbrowse : chr3L:4407144-4420266 (+) // 100.0 //
Probeset : 1623536_s_at
Accessions : protein= NP_001097503; /// NP_001097504; /// NP_647900; /// NP_728990; /// NP_728991; /// NP_728992;, nucleotide= NM_001104033; /// NM_001104034; /// NM_139643; /// NM_168083; /// NM_168084; /// NM_168085;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0035542.
BDGP gene expression has embryonic in situ data for CG11347: 74 pix of staining in 28 body parts.
BioGrid reports that CG11347 interacts with CG11876 CG12334 CG32672 CG31224 CG3314 CG5792 .
VDRC has 3 RNAi stocks for FBgn0035542 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	375 ± 9	4 of 4	1.70	Up
Head	288 ± 32	4 of 4	1.30	None
Eye	711 ± 31	4 of 4	3.25	Up
Thoracicoabdominal ganglion	365 ± 15	4 of 4	1.70	Up
Salivary gland	322 ± 67	4 of 4	1.47	None
Crop	681 ± 36	4 of 4	3.10	Up
Midgut	142 ± 2	4 of 4	0.70	Down
Tubule	89 ± 15	3 of 4	0.40	Down
Hindgut	374 ± 10	4 of 4	1.70	Up
Heart	808 ± 37	4 of 4	3.69	Up
Fat body	599 ± 143	4 of 4	2.74	Up
Ovary	33 ± 3	4 of 4	0.20	Down
Testis	145 ± 2	4 of 4	0.70	Down
Male accessory glands	253 ± 9	4 of 4	1.20	Up
Virgin spermatheca	213 ± 7	4 of 4	0.98	None
Mated spermatheca	307 ± 12	4 of 4	1.41	Up
Adult carcass	728 ± 73	4 of 4	3.30	Up
Larval CNS	83 ± 3	4 of 4	0.38	Down
Larval Salivary gland	40 ± 2	4 of 4	0.18	Down
Larval midgut	368 ± 65	4 of 4	1.68	None
Larval tubule	212 ± 12	4 of 4	1.00	None
Larval hindgut	224 ± 14	4 of 4	1.02	None
Larval fat body	385 ± 34	4 of 4	1.80	Up
Larval trachea	263 ± 48	4 of 4	1.20	None
Larval carcass	528 ± 141	4 of 4	2.42	None
S2 cells (growing)	118 ± 5	4 of 4	0.54	Down
Whole fly	218 ± 8	4 of 4

Looking for FBgn0035542. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720