Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035608 through 18771 annotations produced 1 hits



(CG10630):

Annotation Number : CG10630
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035608
Gbrowse : chr3L:5490622-5492030 (-) // 100.0 //
Probeset : 1626606_at
Accessions : protein= NP_647966;, nucleotide= NM_139709;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003725 // double-stranded RNA binding // inferred fro
FlyMine data for FBgn0035608.
TRiP has 1 RNAi stocks for FBgn0035608 available for purchase.
VDRC has 1 RNAi stocks for FBgn0035608 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain9 22 of 4 0.10Down
Head9 10 of 4 0.10Down
Eye4 10 of 4 0.06Down
Thoracicoabdominal ganglion10 02 of 4 0.10Down
Salivary gland24 21 of 4 0.34Down
Crop13 31 of 4 0.20Down
Midgut7 10 of 4 0.10Down
Tubule16 03 of 4 0.20Down
Hindgut9 12 of 4 0.10Down
Heart6 13 of 4 0.09Down
Fat body34 144 of 4 0.49Down
Ovary8 22 of 4 0.10Down
Testis1027 204 of 414.50Up
Male accessory glands23 23 of 4 0.30Down
Virgin spermatheca21 14 of 4 0.30Down
Mated spermatheca32 84 of 4 0.45Down
Adult carcass8 31 of 4 0.10Down
Larval CNS23 94 of 4 0.33Down
Larval Salivary gland11 11 of 4 0.16Down
Larval midgut5 10 of 4 0.07Down
Larval tubule7 10 of 4 0.10Down
Larval hindgut10 04 of 4 0.14Down
Larval fat body213 734 of 4 3.00None
Larval trachea11 62 of 4 0.17Down
Larval carcass8 20 of 4 0.12Down
S2 cells (growing)1119 194 of 415.82Up
Whole fly70 44 of 4

Looking for FBgn0035608. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime