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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035624 through 18771 annotations produced 1 hits



Eaf6 (Eaf6):

Annotation Number : CG12756
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035624
Gbrowse : chr3L:5600258-5601340 (-) // 100.0 //
Probeset : 1633602_at
Accessions : protein= NP_647981;, nucleotide= NM_139724;
Pathway : 0035267 // NuA4 histone acetyltransferase complex // inferred from direct assay
FlyMine data for FBgn0035624.
BioGrid reports that CG12756 interacts with CG2210 CG6874 .
TRiP has 2 RNAi stocks for FBgn0035624 available for purchase.
VDRC has 3 RNAi stocks for FBgn0035624 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain71 ± 44 of 4 1.00None
Head43 ± 34 of 4 0.60Down
Eye74 ± 24 of 4 1.08None
Thoracicoabdominal ganglion55 ± 24 of 4 0.80Down
Salivary gland74 ± 42 of 4 1.07None
Crop57 ± 14 of 4 0.80None
Midgut37 ± 13 of 4 0.50Down
Tubule19 ± 01 of 4 0.30Down
Hindgut44 ± 44 of 4 0.60Down
Heart35 ± 24 of 4 0.51Down
Fat body35 ± 12 of 4 0.51Down
Ovary168 ± 64 of 4 2.40Up
Testis115 ± 44 of 4 1.70Up
Male accessory glands72 ± 44 of 4 1.00None
Virgin spermatheca55 ± 14 of 4 0.80Down
Mated spermatheca50 ± 24 of 4 0.74Down
Adult carcass44 ± 33 of 4 0.60Down
Larval CNS98 ± 104 of 4 1.42Up
Larval Salivary gland73 ± 44 of 4 1.07None
Larval midgut28 ± 20 of 4 0.41Down
Larval tubule38 ± 34 of 4 0.60Down
Larval hindgut47 ± 04 of 4 0.69Down
Larval fat body41 ± 14 of 4 0.60Down
Larval trachea53 ± 44 of 4 0.78Down
Larval carcass41 ± 44 of 4 0.61Down
S2 cells (growing)67 ± 24 of 4 0.97None
Whole fly68 ± 44 of 4

Looking for FBgn0035624. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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