FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035626 through 18771 annotations produced 1 hits

lin-28 (lin-28):

Annotation Number : CG17334
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035626
Gbrowse : chr3L:5647782-5650484 (+) // 100.0 //
Probeset : 1631236_at
Accessions : protein= NP_647983;, nucleotide= NM_139726;
Pathway : DNA-dependent // inferred from electronic annotation"
Interpro : 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from electr
FlyMine data for FBgn0035626.
BDGP gene expression has embryonic in situ data for lin-28: 37 pix of staining in 18 body parts.
BioGrid reports that CG17334 interacts with CG3978 .
TRiP has 1 RNAi stocks for FBgn0035626 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.40	None
Head	2 ± 0	0 of 4	0.20	None
Eye	3 ± 1	0 of 4	0.34	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.30	None
Salivary gland	5 ± 0	0 of 4	0.52	None
Crop	6 ± 1	0 of 4	0.70	None
Midgut	8 ± 1	0 of 4	0.80	None
Tubule	9 ± 1	0 of 4	0.90	None
Hindgut	6 ± 1	0 of 4	0.60	None
Heart	3 ± 1	0 of 4	0.38	None
Fat body	3 ± 1	0 of 4	0.32	None
Ovary	1 ± 0	0 of 4	0.10	None
Testis	3 ± 1	0 of 4	0.40	None
Male accessory glands	117 ± 11	4 of 4	11.50	Up
Virgin spermatheca	6 ± 2	0 of 4	0.61	None
Mated spermatheca	8 ± 1	0 of 4	0.85	None
Adult carcass	7 ± 3	0 of 4	0.70	None
Larval CNS	2 ± 0	0 of 4	0.21	None
Larval Salivary gland	4 ± 0	0 of 4	0.44	None
Larval midgut	24 ± 5	0 of 4	2.40	None
Larval tubule	4 ± 2	0 of 4	0.50	None
Larval hindgut	3 ± 1	0 of 4	0.39	None
Larval fat body	12 ± 3	1 of 4	1.20	None
Larval trachea	3 ± 2	0 of 4	0.31	None
Larval carcass	6 ± 2	0 of 4	0.62	None
S2 cells (growing)	1 ± 0	0 of 4	0.17	None
Whole fly	10 ± 2	0 of 4

Looking for FBgn0035626. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720