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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035630 through 18771 annotations produced 1 hits



proliferation-associated protein (CG10576):

Annotation Number : CG10576
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035630
Gbrowse : chr3L:5755126-5758631 (-) // 100.0 //
Probeset : 1624981_a_at
Accessions : protein= NP_647984; /// NP_729089;, nucleotide= NM_139727; /// NM_168130;
Interpro : 0004177 // aminopeptidase activity // inferred from sequence or structural similarity /// 0005515 // protein binding //
FlyMine data for FBgn0035630.
BioGrid reports that CG10576 interacts with CG11121 CG1474 CG9083 .
TRiP has 1 RNAi stocks for FBgn0035630 available for purchase.
VDRC has 2 RNAi stocks for FBgn0035630 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain174 ± 14 of 4 0.30Down
Head218 ± 184 of 4 0.40Down
Eye111 ± 64 of 4 0.19Down
Thoracicoabdominal ganglion128 ± 44 of 4 0.20Down
Salivary gland492 ± 434 of 4 0.85None
Crop239 ± 174 of 4 0.40Down
Midgut432 ± 214 of 4 0.70None
Tubule298 ± 204 of 4 0.50Down
Hindgut308 ± 174 of 4 0.50Down
Heart179 ± 104 of 4 0.31Down
Fat body450 ± 874 of 4 0.78None
Ovary782 ± 164 of 4 1.30None
Testis417 ± 94 of 4 0.70None
Male accessory glands1149 ± 444 of 4 2.00Up
Virgin spermatheca243 ± 104 of 4 0.42Down
Mated spermatheca323 ± 84 of 4 0.56Down
Adult carcass259 ± 154 of 4 0.40Down
Larval CNS394 ± 404 of 4 0.68None
Larval Salivary gland963 ± 814 of 4 1.66Up
Larval midgut301 ± 374 of 4 0.52Down
Larval tubule199 ± 194 of 4 0.30Down
Larval hindgut394 ± 374 of 4 0.68None
Larval fat body291 ± 394 of 4 0.50Down
Larval trachea613 ± 854 of 4 1.06None
Larval carcass478 ± 564 of 4 0.83None
S2 cells (growing)883 ± 164 of 4 1.52Up
Whole fly580 ± 664 of 4

Looking for FBgn0035630. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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