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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035697 through 18771 annotations produced 1 hits



/// (CG10163 /// DsecCG10163):

Annotation Number : CG10163
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035697
Gbrowse : chr3L:6250605-6251860 (-) // 100.0 //
Probeset : 1623681_at
Accessions : protein= NP_648042;, nucleotide= NM_139785;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0008970 // phospholipase A1 activity // inferre
FlyMine data for FBgn0035697.
Homophila reports that CG10163 is a close match (2e-12) to human gene LIPI;LPDL;PRED5 (NP_945347), a gene associated with {Hypertriglyceridemia, susceptibility to}, 145750 (3).
BioGrid reports that CG10163 interacts with CG7891 .
TRiP has 1 RNAi stocks for FBgn0035697 available for purchase.
VDRC has 3 RNAi stocks for FBgn0035697 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.00Down
Head1 ± 00 of 4 0.00Down
Eye2 ± 10 of 4 0.05Down
Thoracicoabdominal ganglion2 ± 10 of 4 0.10Down
Salivary gland6 ± 10 of 4 0.12Down
Crop3 ± 10 of 4 0.10Down
Midgut33 ± 40 of 4 0.70Down
Tubule5 ± 00 of 4 0.10Down
Hindgut4 ± 20 of 4 0.10Down
Heart2 ± 20 of 4 0.05Down
Fat body4 ± 20 of 4 0.08Down
Ovary101 ± 74 of 4 2.00Up
Testis2 ± 00 of 4 0.00Down
Male accessory glands4 ± 10 of 4 0.10Down
Virgin spermatheca3 ± 10 of 4 0.07Down
Mated spermatheca5 ± 10 of 4 0.11Down
Adult carcass4 ± 20 of 4 0.10Down
Larval CNS2 ± 20 of 4 0.05Down
Larval Salivary gland6 ± 20 of 4 0.13Down
Larval midgut7 ± 20 of 4 0.14Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut1 ± 00 of 4 0.02Down
Larval fat body7 ± 10 of 4 0.20Down
Larval trachea2 ± 20 of 4 0.04Down
Larval carcass5 ± 00 of 4 0.11Down
S2 cells (growing)5 ± 10 of 4 0.11Down
Whole fly50 ± 44 of 4

Looking for FBgn0035697. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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