Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035710 through 18771 annotations produced 1 hits



SP1173 (SP1173):

Annotation Number : CG10121
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035710
Gbrowse : chr3L:6682424-6696619 (-) // 100.0 //
Probeset : 1633553_s_at
Accessions : protein= NP_648053; /// NP_729183; /// NP_729184; /// NP_729185;, nucleotide= NM_139796; /// NM_168176; /// NM_168177; /// NM_168178;
FlyMine data for FBgn0035710.
BDGP gene expression has embryonic in situ data for SP1173: 30 pix of staining in 14 body parts.
VDRC has 2 RNAi stocks for FBgn0035710 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain66 44 of 4 0.60Down
Head155 54 of 4 1.40Up
Eye63 24 of 4 0.55Down
Thoracicoabdominal ganglion151 84 of 4 1.30Up
Salivary gland16 22 of 4 0.14Down
Crop282 124 of 4 2.50Up
Midgut18 24 of 4 0.20Down
Tubule5 00 of 4 0.00Down
Hindgut129 64 of 4 1.10None
Heart86 134 of 4 0.75None
Fat body134 214 of 4 1.18None
Ovary38 34 of 4 0.30Down
Testis4 21 of 4 0.00Down
Male accessory glands68 34 of 4 0.60Down
Virgin spermatheca81 124 of 4 0.71None
Mated spermatheca91 54 of 4 0.80Down
Adult carcass254 154 of 4 2.20Up
Larval CNS293 304 of 4 2.57Up
Larval Salivary gland40 64 of 4 0.36Down
Larval midgut13 23 of 4 0.12Down
Larval tubule6 10 of 4 0.10Down
Larval hindgut556 204 of 4 4.88Up
Larval fat body116 124 of 4 1.00None
Larval trachea574 644 of 4 5.04Up
Larval carcass413 464 of 4 3.62Up
S2 cells (growing)262 84 of 4 2.30Up
Whole fly114 54 of 4

Looking for FBgn0035710. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime