FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035719 through 18771 annotations produced 2 hits

CG14821 (tow):

Annotation Number : S.C3L000873
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035719
Gbrowse : chr3L:6937790-6939547 (+) // 100.0 //
Probeset : 1640023_s_at
Accessions : protein= NP_001097526; /// NP_648061;, nucleotide= NM_001104056; /// NM_139804;
Pathway : 0005634 // nucleus // inferred from direct assay
FlyMine data for FBgn0035719.
BDGP gene expression has embryonic in situ data for CG14821: 9 pix of staining in 3 body parts.
VDRC has 1 RNAi stocks for FBgn0035719 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	44 ± 2	4 of 4	9.50	Up
Head	12 ± 3	3 of 4	2.70	None
Eye	16 ± 0	4 of 4	3.63	Up
Thoracicoabdominal ganglion	26 ± 1	4 of 4	5.80	Up
Salivary gland	9 ± 2	0 of 4	2.07	None
Crop	4 ± 0	0 of 4	1.00	None
Midgut	6 ± 2	0 of 4	1.40	None
Tubule	3 ± 0	0 of 4	0.80	None
Hindgut	5 ± 1	0 of 4	1.10	None
Heart	7 ± 1	1 of 4	1.54	None
Fat body	6 ± 3	0 of 4	1.42	None
Ovary	3 ± 0	0 of 4	0.70	None
Testis	2 ± 0	0 of 4	0.50	None
Male accessory glands	6 ± 1	0 of 4	1.30	None
Virgin spermatheca	3 ± 0	0 of 4	0.69	None
Mated spermatheca	2 ± 0	0 of 4	0.53	Down
Adult carcass	1 ± 0	0 of 4	0.30	Down
Larval CNS	17 ± 3	4 of 4	3.79	Up
Larval Salivary gland	6 ± 2	0 of 4	1.31	None
Larval midgut	5 ± 1	0 of 4	1.08	None
Larval tubule	5 ± 2	0 of 4	1.10	None
Larval hindgut	4 ± 1	0 of 4	0.85	None
Larval fat body	5 ± 1	0 of 4	1.10	None
Larval trachea	7 ± 3	0 of 4	1.51	None
Larval carcass	6 ± 2	1 of 4	1.30	None
S2 cells (growing)	13 ± 2	2 of 4	2.96	Up
Whole fly	4 ± 0	1 of 4

CG14821 (tow):

Annotation Number : CG14821
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035719
Gbrowse : chr3L:6936055-6941765 (+) // 100.0 //
Probeset : 1640773_at
Accessions : protein= NP_001097526; /// NP_648061;, nucleotide= NM_001104056; /// NM_139804;
Pathway : 0005634 // nucleus // inferred from direct assay
FlyMine data for FBgn0035719.
BDGP gene expression has embryonic in situ data for CG14821: 9 pix of staining in 3 body parts.
VDRC has 1 RNAi stocks for FBgn0035719 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	171 ± 6	4 of 4	16.20	Up
Head	44 ± 3	4 of 4	4.20	Up
Eye	57 ± 4	4 of 4	5.46	Up
Thoracicoabdominal ganglion	113 ± 5	4 of 4	10.70	Up
Salivary gland	1 ± 0	0 of 4	0.13	Down
Crop	19 ± 3	0 of 4	1.80	None
Midgut	10 ± 2	0 of 4	1.00	None
Tubule	6 ± 1	0 of 4	0.60	Down
Hindgut	19 ± 1	0 of 4	1.90	Up
Heart	31 ± 1	4 of 4	2.94	Up
Fat body	8 ± 7	0 of 4	0.83	None
Ovary	2 ± 1	0 of 4	0.30	Down
Testis	5 ± 0	0 of 4	0.50	Down
Male accessory glands	3 ± 0	0 of 4	0.30	Down
Virgin spermatheca	6 ± 1	0 of 4	0.64	None
Mated spermatheca	8 ± 1	0 of 4	0.79	None
Adult carcass	8 ± 3	0 of 4	0.80	None
Larval CNS	80 ± 2	4 of 4	7.62	Up
Larval Salivary gland	11 ± 4	0 of 4	1.06	None
Larval midgut	4 ± 1	0 of 4	0.41	Down
Larval tubule	7 ± 2	0 of 4	0.70	None
Larval hindgut	19 ± 1	0 of 4	1.80	Up
Larval fat body	13 ± 2	0 of 4	1.30	None
Larval trachea	13 ± 3	1 of 4	1.26	None
Larval carcass	22 ± 3	0 of 4	2.14	Up
S2 cells (growing)	31 ± 1	1 of 4	3.01	Up
Whole fly	10 ± 1	0 of 4

Looking for FBgn0035719. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720