FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035720 through 18771 annotations produced 2 hits

(CG10077):

Annotation Number : CG10077
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035720
Gbrowse : chr3L:6944885-6947350 (-) // 100.0 //
Probeset : 1638060_at
Accessions : protein= NP_648062; /// NP_729194;, nucleotide= NM_139805; /// NM_168182;
Pathway : 0005875 // microtubule associated complex // inferred from direct assay
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fr
FlyMine data for FBgn0035720.
BioGrid reports that CG10077 interacts with CG16889 .
TRiP has 2 RNAi stocks for FBgn0035720 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1249 ± 54	4 of 4	20.80	Up
Head	108 ± 11	4 of 4	1.80	Up
Eye	625 ± 19	4 of 4	10.40	Up
Thoracicoabdominal ganglion	1155 ± 120	4 of 4	19.20	Up
Salivary gland	353 ± 76	4 of 4	5.88	Up
Crop	193 ± 13	4 of 4	3.20	Up
Midgut	75 ± 3	4 of 4	1.30	None
Tubule	193 ± 15	4 of 4	3.20	Up
Hindgut	208 ± 9	4 of 4	3.50	Up
Heart	264 ± 30	4 of 4	4.39	Up
Fat body	128 ± 15	4 of 4	2.14	Up
Ovary	34 ± 2	4 of 4	0.60	Down
Testis	29 ± 3	4 of 4	0.50	Down
Male accessory glands	402 ± 22	4 of 4	6.70	Up
Virgin spermatheca	250 ± 40	4 of 4	4.17	Up
Mated spermatheca	348 ± 50	4 of 4	5.80	Up
Adult carcass	170 ± 12	4 of 4	2.80	Up
Larval CNS	243 ± 14	4 of 4	4.04	Up
Larval Salivary gland	256 ± 15	4 of 4	4.26	Up
Larval midgut	31 ± 5	4 of 4	0.53	Down
Larval tubule	121 ± 7	4 of 4	2.00	Up
Larval hindgut	78 ± 6	4 of 4	1.30	None
Larval fat body	112 ± 4	4 of 4	1.90	Up
Larval trachea	225 ± 25	4 of 4	3.76	Up
Larval carcass	72 ± 7	4 of 4	1.20	None
S2 cells (growing)	46 ± 1	4 of 4	0.78	None
Whole fly	60 ± 6	4 of 4

(CG10077):

Annotation Number : CG10077
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035720
Gbrowse : chr3L:6942586-6949004 (-) // 100.0 //
Probeset : 1629250_at
Accessions : protein= NP_648062; /// NP_729194;, nucleotide= NM_139805; /// NM_168182;
Pathway : 0005875 // microtubule associated complex // inferred from direct assay
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fr
FlyMine data for FBgn0035720.
BioGrid reports that CG10077 interacts with CG16889 .
TRiP has 2 RNAi stocks for FBgn0035720 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2719 ± 29	4 of 4	2.80	Up
Head	1139 ± 56	4 of 4	1.20	Up
Eye	1778 ± 62	4 of 4	1.85	Up
Thoracicoabdominal ganglion	2773 ± 48	4 of 4	2.90	Up
Salivary gland	1599 ± 103	4 of 4	1.66	Up
Crop	1025 ± 29	4 of 4	1.10	None
Midgut	485 ± 9	4 of 4	0.50	Down
Tubule	602 ± 41	4 of 4	0.60	Down
Hindgut	1117 ± 17	4 of 4	1.20	Up
Heart	845 ± 28	4 of 4	0.88	Down
Fat body	994 ± 76	4 of 4	1.03	None
Ovary	1361 ± 11	4 of 4	1.40	Up
Testis	1798 ± 66	4 of 4	1.90	Up
Male accessory glands	1993 ± 39	4 of 4	2.10	Up
Virgin spermatheca	1378 ± 101	4 of 4	1.43	Up
Mated spermatheca	1322 ± 93	4 of 4	1.37	Up
Adult carcass	813 ± 21	4 of 4	0.80	Down
Larval CNS	1675 ± 94	4 of 4	1.74	Up
Larval Salivary gland	1608 ± 58	4 of 4	1.67	Up
Larval midgut	320 ± 22	4 of 4	0.33	Down
Larval tubule	721 ± 14	4 of 4	0.70	Down
Larval hindgut	1002 ± 15	4 of 4	1.04	None
Larval fat body	956 ± 38	4 of 4	1.00	None
Larval trachea	1221 ± 101	4 of 4	1.27	Up
Larval carcass	855 ± 24	4 of 4	0.89	Down
S2 cells (growing)	692 ± 21	4 of 4	0.72	Down
Whole fly	964 ± 22	4 of 4

Looking for FBgn0035720. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720