FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035734 through 18771 annotations produced 3 hits

(CG14823):

Annotation Number : CG14823
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035734
Gbrowse : chr3L:7059413-7060698 (+) // 100.0 //
Probeset : 1641741_a_at
Accessions : protein= NP_648074; /// NP_729205; /// NP_729206; /// NP_729207;, nucleotide= NM_139817; /// NM_168186; /// NM_168187; /// NM_168188;
Interpro : 0003796 // lysozyme activity // inferred from electronic annotation
FlyMine data for FBgn0035734.
BDGP gene expression has embryonic in situ data for CG14823: 4 pix of staining in 1 body parts.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.20	Down
Head	134 ± 16	4 of 4	5.30	Up
Eye	226 ± 12	4 of 4	8.89	Up
Thoracicoabdominal ganglion	7 ± 2	0 of 4	0.30	Down
Salivary gland	5 ± 2	0 of 4	0.23	Down
Crop	4 ± 2	0 of 4	0.20	Down
Midgut	1 ± 0	0 of 4	0.10	Down
Tubule	5 ± 0	0 of 4	0.20	Down
Hindgut	17 ± 1	0 of 4	0.70	Down
Heart	125 ± 19	4 of 4	4.94	Up
Fat body	265 ± 58	4 of 4	10.44	Up
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	6 ± 1	0 of 4	0.30	Down
Male accessory glands	4 ± 1	0 of 4	0.20	Down
Virgin spermatheca	150 ± 5	4 of 4	5.93	Up
Mated spermatheca	102 ± 3	4 of 4	4.04	Up
Adult carcass	152 ± 11	4 of 4	6.00	Up
Larval CNS	2 ± 3	0 of 4	0.11	Down
Larval Salivary gland	8 ± 1	0 of 4	0.34	Down
Larval midgut	2 ± 1	0 of 4	0.11	Down
Larval tubule	2 ± 0	0 of 4	0.10	Down
Larval hindgut	6 ± 1	0 of 4	0.24	Down
Larval fat body	22 ± 6	0 of 4	0.90	None
Larval trachea	8 ± 10	0 of 4	0.32	Down
Larval carcass	4 ± 0	0 of 4	0.20	Down
S2 cells (growing)	3 ± 0	0 of 4	0.12	Down
Whole fly	25 ± 1	1 of 4

(CG14823):

Annotation Number : CG14823
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035734
Gbrowse : chr3L:7059413-7060222 (+) // 100.0 //
Probeset : 1631711_at
Accessions : protein= NP_648074; /// NP_729205; /// NP_729206; /// NP_729207;, nucleotide= NM_139817; /// NM_168186; /// NM_168187; /// NM_168188;
Interpro : 0003796 // lysozyme activity // inferred from electronic annotation
FlyMine data for FBgn0035734.
BDGP gene expression has embryonic in situ data for CG14823: 4 pix of staining in 1 body parts.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	1.30	None
Head	6 ± 2	2 of 4	8.50	None
Eye	7 ± 0	3 of 4	9.66	Up
Thoracicoabdominal ganglion	0 ± 0	0 of 4	1.10	None
Salivary gland	3 ± 1	0 of 4	4.75	None
Crop	0 ± 0	0 of 4	1.10	None
Midgut	0 ± 0	0 of 4	0.30	None
Tubule	1 ± 0	0 of 4	1.30	None
Hindgut	1 ± 0	0 of 4	1.30	None
Heart	6 ± 1	4 of 4	7.88	Up
Fat body	27 ± 13	4 of 4	34.06	Up
Ovary	0 ± 0	0 of 4	0.10	None
Testis	0 ± 0	0 of 4	0.70	None
Male accessory glands	2 ± 1	0 of 4	2.60	None
Virgin spermatheca	31 ± 5	4 of 4	39.84	Up
Mated spermatheca	13 ± 2	4 of 4	16.63	Up
Adult carcass	6 ± 3	0 of 4	8.30	None
Larval CNS	1 ± 1	1 of 4	1.34	None
Larval Salivary gland	0 ± 0	0 of 4	1.06	None
Larval midgut	0 ± 0	0 of 4	0.19	None
Larval tubule	1 ± 0	0 of 4	1.50	None
Larval hindgut	0 ± 0	0 of 4	0.75	None
Larval fat body	0 ± 0	0 of 4	0.70	None
Larval trachea	0 ± 0	0 of 4	0.88	None
Larval carcass	0 ± 0	0 of 4	0.19	None
S2 cells (growing)	0 ± 0	0 of 4	0.38	None
Whole fly	0 ± 0	0 of 4

(CG14823):

Annotation Number : CG14823
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035734
Gbrowse : chr3L:7059413-7061335 (+) // 100.0 //
Probeset : 1624950_a_at
Accessions : protein= NP_648074; /// NP_729205; /// NP_729206; /// NP_729207;, nucleotide= NM_139817; /// NM_168186; /// NM_168187; /// NM_168188;
Interpro : 0003796 // lysozyme activity // inferred from electronic annotation
FlyMine data for FBgn0035734.
BDGP gene expression has embryonic in situ data for CG14823: 4 pix of staining in 1 body parts.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	12 ± 3	0 of 4	0.30	Down
Head	203 ± 8	4 of 4	4.50	Up
Eye	480 ± 30	4 of 4	10.65	Up
Thoracicoabdominal ganglion	9 ± 2	0 of 4	0.20	Down
Salivary gland	4 ± 0	0 of 4	0.10	Down
Crop	3 ± 1	0 of 4	0.10	Down
Midgut	2 ± 0	0 of 4	0.00	Down
Tubule	5 ± 1	0 of 4	0.10	Down
Hindgut	18 ± 4	0 of 4	0.40	Down
Heart	218 ± 29	4 of 4	4.84	Up
Fat body	306 ± 67	4 of 4	6.79	Up
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	15 ± 1	2 of 4	0.30	Down
Male accessory glands	4 ± 1	0 of 4	0.10	Down
Virgin spermatheca	406 ± 15	4 of 4	9.00	Up
Mated spermatheca	293 ± 21	4 of 4	6.50	Up
Adult carcass	261 ± 18	4 of 4	5.80	Up
Larval CNS	1 ± 1	0 of 4	0.04	Down
Larval Salivary gland	6 ± 2	0 of 4	0.15	Down
Larval midgut	5 ± 1	0 of 4	0.12	Down
Larval tubule	4 ± 3	0 of 4	0.10	Down
Larval hindgut	13 ± 2	0 of 4	0.30	Down
Larval fat body	59 ± 12	3 of 4	1.30	None
Larval trachea	17 ± 9	0 of 4	0.38	Down
Larval carcass	7 ± 3	0 of 4	0.16	Down
S2 cells (growing)	1 ± 0	0 of 4	0.03	Down
Whole fly	45 ± 3	1 of 4

Looking for FBgn0035734. 3 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720