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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035751 through 18771 annotations produced 1 hits



(CG14829):

Annotation Number : CG14829
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035751
Gbrowse : chr3L:7230473-7231136 (-) // 100.0 //
Probeset : 1625347_at
Accessions : protein= NP_648089;, nucleotide= NM_139832;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0035751.
BioGrid reports that CG14829 interacts with CG8831 CG1641 CG18362 CG7765 CG8189 CG8479 CG9277 .
VDRC has 3 RNAi stocks for FBgn0035751 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.70None
Head1 ± 00 of 4 0.40None
Eye0 ± 00 of 4 0.18None
Thoracicoabdominal ganglion1 ± 00 of 4 0.40None
Salivary gland1 ± 00 of 4 0.55None
Crop3 ± 00 of 4 1.00None
Midgut4 ± 10 of 4 1.30None
Tubule4 ± 00 of 4 1.40Up
Hindgut41 ± 34 of 412.80Up
Heart2 ± 10 of 4 0.66None
Fat body2 ± 10 of 4 0.65None
Ovary1 ± 00 of 4 0.40None
Testis3 ± 00 of 4 1.10None
Male accessory glands3 ± 10 of 4 1.20None
Virgin spermatheca0 ± 00 of 4 0.26None
Mated spermatheca1 ± 00 of 4 0.38None
Adult carcass3 ± 20 of 4 0.90None
Larval CNS0 ± 00 of 4 0.20None
Larval Salivary gland3 ± 00 of 4 0.94None
Larval midgut3 ± 10 of 4 1.18None
Larval tubule6 ± 10 of 4 1.90None
Larval hindgut32 ± 14 of 4 9.93Up
Larval fat body2 ± 10 of 4 0.80None
Larval trachea4 ± 10 of 4 1.45None
Larval carcass1 ± 00 of 4 0.32None
S2 cells (growing)4 ± 10 of 4 1.48None
Whole fly3 ± 10 of 4

Looking for FBgn0035751. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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