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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035753 through 18771 annotations produced 1 hits



Ribosomal protein L18 (RpL18):

Annotation Number : CG8615
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035753
Gbrowse : chr3L:7233293-7234449 (-) // 100.0 //
Probeset : 1629400_at
Accessions : protein= NP_648091;, nucleotide= NM_139834;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic ann
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0035753.
BDGP gene expression has embryonic in situ data for CG8615: 8 pix of staining in 2 body parts.
BioGrid reports that CG8615 interacts with CG9173 .
VDRC has 3 RNAi stocks for FBgn0035753 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2596 504 of 4 0.70Down
Head4024 1054 of 4 1.20Up
Eye4418 1614 of 4 1.27Up
Thoracicoabdominal ganglion3241 534 of 4 0.90None
Salivary gland6865 2164 of 4 1.98Up
Crop4709 1904 of 4 1.40Up
Midgut4673 1024 of 4 1.30Up
Tubule3110 424 of 4 0.90Down
Hindgut4305 944 of 4 1.20Up
Heart4980 2584 of 4 1.43Up
Fat body5199 6734 of 4 1.50Up
Ovary3075 464 of 4 0.90Down
Testis779 294 of 4 0.20Down
Male accessory glands7302 1854 of 4 2.10Up
Virgin spermatheca4401 2064 of 4 1.27Up
Mated spermatheca4544 664 of 4 1.31Up
Adult carcass4791 1604 of 4 1.40Up
Larval CNS2522 1214 of 4 0.73Down
Larval Salivary gland6378 1524 of 4 1.84Up
Larval midgut4052 784 of 4 1.17Up
Larval tubule3835 484 of 4 1.10None
Larval hindgut3896 204 of 4 1.12Up
Larval fat body6804 7274 of 4 2.00Up
Larval trachea4938 1064 of 4 1.42Up
Larval carcass4296 2554 of 4 1.24Up
S2 cells (growing)3768 114 of 4 1.08None
Whole fly3474 1274 of 4

Looking for FBgn0035753. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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