Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035777 through 18771 annotations produced 1 hits



(CG8563):

Annotation Number : CG8563
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035777
Gbrowse : chr3L:7384178-7389116 (+) // 100.0 //
Probeset : 1626420_at
Accessions : protein= NP_648116;, nucleotide= NM_139859;
Interpro : 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activ
FlyMine data for FBgn0035777.
Homophila reports that CG8563 is a close match (5e-12) to human gene CPN;CPN1;SCPN (NP_001299), a gene associated with Carboxypeptidase N deficiency, 212070 (3).
VDRC has 2 RNAi stocks for FBgn0035777 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.20None
Head6 ± 21 of 4 1.40None
Eye6 ± 10 of 4 1.43None
Thoracicoabdominal ganglion2 ± 10 of 4 0.60None
Salivary gland6 ± 20 of 4 1.60None
Crop11 ± 31 of 4 2.50None
Midgut4 ± 10 of 4 1.10None
Tubule1 ± 00 of 4 0.40Down
Hindgut5 ± 30 of 4 1.10None
Heart1 ± 00 of 4 0.36None
Fat body2 ± 00 of 4 0.56None
Ovary1 ± 00 of 4 0.40None
Testis1 ± 00 of 4 0.30None
Male accessory glands2 ± 10 of 4 0.60None
Virgin spermatheca2 ± 10 of 4 0.57None
Mated spermatheca1 ± 00 of 4 0.35None
Adult carcass1 ± 00 of 4 0.40None
Larval CNS3 ± 40 of 4 0.80None
Larval Salivary gland4 ± 10 of 4 1.02None
Larval midgut6 ± 10 of 4 1.48None
Larval tubule2 ± 00 of 4 0.50None
Larval hindgut7 ± 21 of 4 1.72None
Larval fat body2 ± 00 of 4 0.60None
Larval trachea12 ± 33 of 4 2.97Up
Larval carcass27 ± 44 of 4 6.43Up
S2 cells (growing)2 ± 00 of 4 0.49None
Whole fly4 ± 10 of 4

Looking for FBgn0035777. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime