Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035785 through 18771 annotations produced 1 hits



(CG8546):

Annotation Number : CG8546
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035785
Gbrowse : chr3L:7449128-7451453 (+) // 100.0 //
Probeset : 1632414_at
Accessions : protein= NP_648125;, nucleotide= NM_139868;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005216 // ion channel activity // inferred from electronic annotation /// 0005272 // sodium channel activity // inferre
FlyMine data for FBgn0035785.
TRiP has 1 RNAi stocks for FBgn0035785 available for purchase.
VDRC has 3 RNAi stocks for FBgn0035785 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.90None
Head9 ± 11 of 4 2.30None
Eye1 ± 00 of 4 0.40None
Thoracicoabdominal ganglion15 ± 23 of 4 3.70Up
Salivary gland13 ± 40 of 4 3.31None
Crop3 ± 00 of 4 0.80None
Midgut3 ± 00 of 4 0.90None
Tubule6 ± 00 of 4 1.70Up
Hindgut4 ± 11 of 4 1.20None
Heart2 ± 00 of 4 0.57None
Fat body11 ± 20 of 4 2.78Up
Ovary2 ± 00 of 4 0.50None
Testis1 ± 00 of 4 0.40None
Male accessory glands9 ± 30 of 4 2.30None
Virgin spermatheca3 ± 00 of 4 0.86None
Mated spermatheca4 ± 10 of 4 1.09None
Adult carcass20 ± 20 of 4 5.10Up
Larval CNS4 ± 20 of 4 1.07None
Larval Salivary gland4 ± 20 of 4 1.09None
Larval midgut5 ± 10 of 4 1.43None
Larval tubule7 ± 10 of 4 1.90None
Larval hindgut5 ± 10 of 4 1.30None
Larval fat body6 ± 10 of 4 1.60None
Larval trachea6 ± 21 of 4 1.63None
Larval carcass22 ± 14 of 4 5.45Up
S2 cells (growing)4 ± 10 of 4 1.14None
Whole fly4 ± 10 of 4

Looking for FBgn0035785. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime