FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035829 through 18771 annotations produced 2 hits

CG8044 (HP4):

Annotation Number : CG8044
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035829
Gbrowse : chr3L:7968537-7969251 (-) // 100.0 //
Probeset : 1632009_at
Accessions : protein= NP_648166; /// NP_729314;, nucleotide= NM_139909; /// NM_168247;
Pathway : "0005701 // polytene chromosome chromocenter // inferred from direct assay /// 0005704 // polytene chromosome band // in
Interpro : telomeric region // inferred from direct assay"
FlyMine data for FBgn0035829.
BioGrid reports that CG8044 interacts with CG8409 .
VDRC has 3 RNAi stocks for FBgn0035829 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	1.50	None
Head	1 ± 0	0 of 4	1.90	None
Eye	1 ± 0	0 of 4	2.32	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	2.40	None
Salivary gland	6 ± 3	0 of 4	11.77	None
Crop	0 ± 0	0 of 4	1.00	None
Midgut	0 ± 0	0 of 4	1.50	None
Tubule	1 ± 0	0 of 4	1.80	None
Hindgut	0 ± 0	0 of 4	1.50	None
Heart	1 ± 0	0 of 4	2.18	None
Fat body	1 ± 0	0 of 4	1.73	None
Ovary	1 ± 0	0 of 4	2.60	None
Testis	0 ± 0	0 of 4	1.10	None
Male accessory glands	3 ± 1	0 of 4	5.40	None
Virgin spermatheca	1 ± 0	0 of 4	2.77	Up
Mated spermatheca	2 ± 1	0 of 4	3.64	None
Adult carcass	1 ± 0	0 of 4	2.20	None
Larval CNS	7 ± 1	0 of 4	12.95	Up
Larval Salivary gland	3 ± 1	0 of 4	5.64	None
Larval midgut	1 ± 0	0 of 4	3.14	None
Larval tubule	0 ± 0	0 of 4	1.30	None
Larval hindgut	0 ± 0	0 of 4	1.64	None
Larval fat body	12 ± 1	0 of 4	22.60	Up
Larval trachea	1 ± 1	0 of 4	3.27	None
Larval carcass	2 ± 0	0 of 4	3.95	None
S2 cells (growing)	1 ± 0	0 of 4	1.82	Up
Whole fly	0 ± 0	0 of 4

CG8044 (HP4):

Annotation Number : CG8044
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035829
Gbrowse : chr3L:7968537-7969251 (-) // 100.0 //
Probeset : 1629941_a_at
Accessions : protein= NP_648166; /// NP_729314;, nucleotide= NM_139909; /// NM_168247;
Pathway : "0005701 // polytene chromosome chromocenter // inferred from direct assay /// 0005704 // polytene chromosome band // in
Interpro : telomeric region // inferred from direct assay"
FlyMine data for FBgn0035829.
BioGrid reports that CG8044 interacts with CG8409 .
VDRC has 3 RNAi stocks for FBgn0035829 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	206 ± 6	4 of 4	0.60	Down
Head	155 ± 4	4 of 4	0.50	Down
Eye	287 ± 6	4 of 4	0.86	None
Thoracicoabdominal ganglion	185 ± 3	4 of 4	0.60	Down
Salivary gland	76 ± 3	4 of 4	0.23	Down
Crop	114 ± 10	4 of 4	0.30	Down
Midgut	119 ± 2	4 of 4	0.40	Down
Tubule	48 ± 3	4 of 4	0.10	Down
Hindgut	102 ± 4	4 of 4	0.30	Down
Heart	163 ± 7	4 of 4	0.49	Down
Fat body	155 ± 17	4 of 4	0.47	Down
Ovary	762 ± 10	4 of 4	2.30	Up
Testis	264 ± 12	4 of 4	0.80	None
Male accessory glands	208 ± 13	4 of 4	0.60	Down
Virgin spermatheca	121 ± 5	4 of 4	0.37	Down
Mated spermatheca	133 ± 5	4 of 4	0.40	Down
Adult carcass	97 ± 9	4 of 4	0.30	Down
Larval CNS	971 ± 20	4 of 4	2.92	Up
Larval Salivary gland	175 ± 22	4 of 4	0.53	Down
Larval midgut	98 ± 7	4 of 4	0.30	Down
Larval tubule	116 ± 7	4 of 4	0.30	Down
Larval hindgut	180 ± 4	4 of 4	0.54	Down
Larval fat body	148 ± 13	4 of 4	0.40	Down
Larval trachea	327 ± 26	4 of 4	0.98	None
Larval carcass	137 ± 3	4 of 4	0.41	Down
S2 cells (growing)	674 ± 23	4 of 4	2.03	Up
Whole fly	333 ± 27	4 of 4

Looking for FBgn0035829. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720