Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035830 through 18771 annotations produced 1 hits



(CG8209):

Annotation Number : CG8209
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035830
Gbrowse : chr3L:7969402-7970956 (+) // 100.0 //
Probeset : 1625389_at
Accessions : protein= NP_648167;, nucleotide= NM_139910;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0008270 // zinc ion binding // inferred from electronic annotation
FlyMine data for FBgn0035830.
BDGP gene expression has embryonic in situ data for CG8209: 11 pix of staining in 5 body parts.
TRiP has 1 RNAi stocks for FBgn0035830 available for purchase.
VDRC has 3 RNAi stocks for FBgn0035830 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain132 54 of 4 0.70Down
Head158 34 of 4 0.80None
Eye102 24 of 4 0.54Down
Thoracicoabdominal ganglion137 64 of 4 0.70Down
Salivary gland183 184 of 4 0.96None
Crop237 34 of 4 1.20Up
Midgut105 104 of 4 0.50Down
Tubule92 34 of 4 0.50Down
Hindgut200 64 of 4 1.00None
Heart216 84 of 4 1.13None
Fat body270 224 of 4 1.41Up
Ovary253 44 of 4 1.30Up
Testis249 144 of 4 1.30Up
Male accessory glands346 64 of 4 1.80Up
Virgin spermatheca61 54 of 4 0.32Down
Mated spermatheca63 24 of 4 0.33Down
Adult carcass274 184 of 4 1.40Up
Larval CNS382 144 of 4 2.00Up
Larval Salivary gland345 134 of 4 1.81Up
Larval midgut191 194 of 4 1.00None
Larval tubule336 44 of 4 1.80Up
Larval hindgut272 94 of 4 1.43Up
Larval fat body218 164 of 4 1.10None
Larval trachea301 324 of 4 1.57Up
Larval carcass274 194 of 4 1.44Up
S2 cells (growing)577 84 of 4 3.02Up
Whole fly191 144 of 4

Looking for FBgn0035830. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime