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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035870 through 18771 annotations produced 1 hits



Gustatory receptor 66a (Gr66a):

Annotation Number : CG7189
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035870
Gbrowse : chr3L:8298435-8300089 (-) // 100.0 //
Probeset : 1639129_at
Accessions : protein= NP_523971;, nucleotide= NM_079247;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0035870.
TRiP has 2 RNAi stocks for FBgn0035870 available for purchase.
VDRC has 2 RNAi stocks for FBgn0035870 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 00 of 4 0.90None
Head12 14 of 4 3.30Up
Eye3 10 of 4 1.07None
Thoracicoabdominal ganglion5 10 of 4 1.60None
Salivary gland8 30 of 4 2.36None
Crop3 10 of 4 0.90None
Midgut2 10 of 4 0.70None
Tubule5 00 of 4 1.40Up
Hindgut4 00 of 4 1.20None
Heart3 01 of 4 1.01None
Fat body4 32 of 4 1.26None
Ovary2 00 of 4 0.60None
Testis4 10 of 4 1.20None
Male accessory glands27 54 of 4 7.60Up
Virgin spermatheca3 11 of 4 1.02None
Mated spermatheca3 11 of 4 0.98None
Adult carcass6 20 of 4 1.90None
Larval CNS3 11 of 4 0.82None
Larval Salivary gland9 11 of 4 2.68Up
Larval midgut5 12 of 4 1.60None
Larval tubule5 22 of 4 1.50None
Larval hindgut3 11 of 4 0.88None
Larval fat body1 00 of 4 0.50None
Larval trachea2 10 of 4 0.80None
Larval carcass3 10 of 4 0.85None
S2 cells (growing)3 00 of 4 0.92None
Whole fly3 10 of 4

Looking for FBgn0035870. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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