FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035906 through 18771 annotations produced 2 hits

(CG6673):

Annotation Number : CG6673
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035906
Gbrowse : chr3L:8515512-8516600 (-) // 100.0 //
Probeset : 1627845_at
Accessions : protein= NP_648236; /// NP_729388;, nucleotide= NM_139979; /// NM_168277;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : "0004364 // glutathione transferase activity // inferred from sequence or structural similarity /// 0004364 // glutathio
FlyMine data for FBgn0035906.
BDGP gene expression has embryonic in situ data for CG6673: 17 pix of staining in 9 body parts.
VDRC has 3 RNAi stocks for FBgn0035906 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	307 ± 4	4 of 4	0.60	Down
Head	660 ± 17	4 of 4	1.40	Up
Eye	1268 ± 34	4 of 4	2.65	Up
Thoracicoabdominal ganglion	390 ± 18	4 of 4	0.80	Down
Salivary gland	670 ± 5	4 of 4	1.40	Up
Crop	1411 ± 31	4 of 4	2.90	Up
Midgut	1276 ± 44	4 of 4	2.70	Up
Tubule	1135 ± 60	4 of 4	2.40	Up
Hindgut	693 ± 4	4 of 4	1.40	Up
Heart	939 ± 66	4 of 4	1.96	Up
Fat body	397 ± 46	4 of 4	0.83	None
Ovary	579 ± 4	4 of 4	1.20	Up
Testis	458 ± 13	4 of 4	1.00	None
Male accessory glands	744 ± 10	4 of 4	1.60	Up
Virgin spermatheca	740 ± 28	4 of 4	1.54	Up
Mated spermatheca	710 ± 26	4 of 4	1.48	Up
Adult carcass	507 ± 6	4 of 4	1.10	None
Larval CNS	515 ± 29	4 of 4	1.08	None
Larval Salivary gland	942 ± 19	4 of 4	1.97	Up
Larval midgut	397 ± 18	4 of 4	0.83	None
Larval tubule	565 ± 10	4 of 4	1.20	Up
Larval hindgut	607 ± 14	4 of 4	1.27	Up
Larval fat body	301 ± 10	4 of 4	0.60	Down
Larval trachea	955 ± 29	4 of 4	1.99	Up
Larval carcass	641 ± 49	4 of 4	1.34	Up
S2 cells (growing)	599 ± 24	4 of 4	1.25	Up
Whole fly	479 ± 27	4 of 4

(CG6673):

Annotation Number : CG6673
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035906
Gbrowse : chr3L:8514538-8516600 (-) // 100.0 //
Probeset : 1638074_at
Accessions : protein= NP_648236; /// NP_729388;, nucleotide= NM_139979; /// NM_168277;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : "0004364 // glutathione transferase activity // inferred from sequence or structural similarity /// 0004364 // glutathio
FlyMine data for FBgn0035906.
BDGP gene expression has embryonic in situ data for CG6673: 17 pix of staining in 9 body parts.
VDRC has 3 RNAi stocks for FBgn0035906 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	61 ± 2	4 of 4	0.70	Down
Head	180 ± 6	4 of 4	1.90	Up
Eye	357 ± 3	4 of 4	3.86	Up
Thoracicoabdominal ganglion	61 ± 1	4 of 4	0.70	Down
Salivary gland	326 ± 22	4 of 4	3.53	Up
Crop	411 ± 11	4 of 4	4.40	Up
Midgut	408 ± 7	4 of 4	4.40	Up
Tubule	399 ± 15	4 of 4	4.30	Up
Hindgut	234 ± 1	4 of 4	2.50	Up
Heart	208 ± 15	4 of 4	2.25	Up
Fat body	157 ± 13	4 of 4	1.69	Up
Ovary	76 ± 1	4 of 4	0.80	None
Testis	30 ± 1	4 of 4	0.30	Down
Male accessory glands	195 ± 5	4 of 4	2.10	Up
Virgin spermatheca	164 ± 13	4 of 4	1.78	Up
Mated spermatheca	147 ± 6	4 of 4	1.59	Up
Adult carcass	143 ± 5	4 of 4	1.50	Up
Larval CNS	135 ± 10	4 of 4	1.46	Up
Larval Salivary gland	461 ± 4	4 of 4	4.98	Up
Larval midgut	125 ± 6	4 of 4	1.35	Up
Larval tubule	292 ± 8	4 of 4	3.20	Up
Larval hindgut	188 ± 8	4 of 4	2.04	Up
Larval fat body	79 ± 13	4 of 4	0.90	None
Larval trachea	305 ± 32	4 of 4	3.29	Up
Larval carcass	171 ± 10	4 of 4	1.85	Up
S2 cells (growing)	51 ± 1	4 of 4	0.56	Down
Whole fly	92 ± 5	4 of 4

Looking for FBgn0035906. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720