Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035914 through 18771 annotations produced 1 hits



(CG6282):

Annotation Number : CG6282
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035914
Gbrowse : chr3L:8597756-8610177 (+) // 100.0 //
Probeset : 1631417_s_at
Accessions : protein= NP_001163381; /// NP_648243; /// NP_788480;, nucleotide= NM_001169910; /// NM_139986; /// NM_176302;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electro
Interpro : "0016491 // oxidoreductase activity // inferred from electronic annotation /// 0016627 // oxidoreductase activity
FlyMine data for FBgn0035914.
VDRC has 1 RNAi stocks for FBgn0035914 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain682 54 of 420.80Up
Head278 154 of 4 8.50Up
Eye611 304 of 418.63Up
Thoracicoabdominal ganglion584 164 of 417.80Up
Salivary gland10 20 of 4 0.31Down
Crop31 14 of 4 0.90None
Midgut1 00 of 4 0.00Down
Tubule6 01 of 4 0.20Down
Hindgut4 10 of 4 0.10Down
Heart4 00 of 4 0.13Down
Fat body10 43 of 4 0.32Down
Ovary4 12 of 4 0.10Down
Testis2 00 of 4 0.10Down
Male accessory glands72 114 of 4 2.20Up
Virgin spermatheca6 00 of 4 0.18Down
Mated spermatheca7 10 of 4 0.22Down
Adult carcass25 43 of 4 0.80None
Larval CNS164 124 of 4 5.02Up
Larval Salivary gland6 21 of 4 0.18Down
Larval midgut4 11 of 4 0.14Down
Larval tubule6 01 of 4 0.20Down
Larval hindgut2 00 of 4 0.07Down
Larval fat body3 10 of 4 0.10Down
Larval trachea10 142 of 4 0.31None
Larval carcass5 10 of 4 0.17Down
S2 cells (growing)1 00 of 4 0.04Down
Whole fly32 14 of 4

Looking for FBgn0035914. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime