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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035932 through 18771 annotations produced 1 hits



(CG13308):

Annotation Number : CG13308
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035932
Gbrowse : chr3L:8801643-8802192 (+) // 100.0 //
Probeset : 1632988_at
Accessions : protein= NP_648261;, nucleotide= NM_140004;
FlyMine data for FBgn0035932.
VDRC has 3 RNAi stocks for FBgn0035932 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 10 of 4 0.90None
Head3 ± 10 of 4 0.70None
Eye6 ± 21 of 4 1.35None
Thoracicoabdominal ganglion3 ± 10 of 4 0.70None
Salivary gland11 ± 51 of 4 2.36None
Crop7 ± 11 of 4 1.60None
Midgut9 ± 10 of 4 2.00None
Tubule79 ± 74 of 416.80Up
Hindgut7 ± 12 of 4 1.50None
Heart4 ± 00 of 4 1.04None
Fat body12 ± 23 of 4 2.72Up
Ovary3 ± 11 of 4 0.80None
Testis6 ± 10 of 4 1.40None
Male accessory glands11 ± 12 of 4 2.40Up
Virgin spermatheca8 ± 02 of 4 1.82Up
Mated spermatheca11 ± 22 of 4 2.32None
Adult carcass6 ± 10 of 4 1.30None
Larval CNS6 ± 00 of 4 1.38None
Larval Salivary gland4 ± 10 of 4 0.92None
Larval midgut6 ± 20 of 4 1.42None
Larval tubule7 ± 10 of 4 1.50None
Larval hindgut4 ± 11 of 4 1.01None
Larval fat body6 ± 10 of 4 1.30None
Larval trachea3 ± 31 of 4 0.78None
Larval carcass5 ± 10 of 4 1.08None
S2 cells (growing)7 ± 10 of 4 1.66None
Whole fly4 ± 00 of 4

Looking for FBgn0035932. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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