FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035945 through 18771 annotations produced 2 hits

(CG5026):

Annotation Number : CG5026
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035945
Gbrowse : chr3L:8961629-8964852 (+) // 100.0 //
Probeset : 1633375_at
Accessions : protein= NP_001163392; /// NP_648271; /// NP_729434;, nucleotide= NM_001169921; /// NM_140014; /// NM_168305;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosph
FlyMine data for FBgn0035945.
Homophila reports that CG5026 is a close match (5e-23) to human gene CMT4B2;MTMR13;SBF2 (NP_112224), a gene associated with Charcot-Marie-Tooth disease, type 4B2, 604563 (3).
BioGrid reports that CG5026 interacts with CG8235 CG9951 CG5359 CG5466 CG8725 .
TRiP has 2 RNAi stocks for FBgn0035945 available for purchase.
VDRC has 3 RNAi stocks for FBgn0035945 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	129 ± 3	4 of 4	1.00	None
Head	92 ± 5	4 of 4	0.70	None
Eye	31 ± 2	4 of 4	0.25	Down
Thoracicoabdominal ganglion	91 ± 1	4 of 4	0.70	None
Salivary gland	59 ± 9	4 of 4	0.46	Down
Crop	110 ± 4	4 of 4	0.90	None
Midgut	64 ± 3	4 of 4	0.50	Down
Tubule	31 ± 2	4 of 4	0.20	Down
Hindgut	73 ± 2	4 of 4	0.60	Down
Heart	77 ± 11	4 of 4	0.61	Down
Fat body	89 ± 10	4 of 4	0.70	None
Ovary	292 ± 13	4 of 4	2.30	Up
Testis	18 ± 1	4 of 4	0.10	Down
Male accessory glands	53 ± 3	4 of 4	0.40	Down
Virgin spermatheca	117 ± 10	4 of 4	0.91	None
Mated spermatheca	116 ± 6	4 of 4	0.91	None
Adult carcass	55 ± 2	4 of 4	0.40	Down
Larval CNS	203 ± 46	4 of 4	1.58	Up
Larval Salivary gland	86 ± 8	4 of 4	0.67	Down
Larval midgut	116 ± 8	4 of 4	0.90	None
Larval tubule	41 ± 2	4 of 4	0.30	Down
Larval hindgut	146 ± 8	4 of 4	1.14	None
Larval fat body	194 ± 20	4 of 4	1.50	Up
Larval trachea	109 ± 11	4 of 4	0.85	None
Larval carcass	169 ± 9	4 of 4	1.32	Up
S2 cells (growing)	188 ± 6	4 of 4	1.47	Up
Whole fly	128 ± 13	4 of 4

(CG5026):

Annotation Number : CG5026
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035945
Gbrowse : chr3L:8961629-8964477 (+) // 100.0 //
Probeset : 1626182_a_at
Accessions : protein= NP_001163392; /// NP_648271; /// NP_729434;, nucleotide= NM_001169921; /// NM_140014; /// NM_168305;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008138 // protein tyrosine/serine/threonine phosph
FlyMine data for FBgn0035945.
Homophila reports that CG5026 is a close match (5e-23) to human gene CMT4B2;MTMR13;SBF2 (NP_112224), a gene associated with Charcot-Marie-Tooth disease, type 4B2, 604563 (3).
BioGrid reports that CG5026 interacts with CG8235 CG9951 CG5359 CG5466 CG8725 .
TRiP has 2 RNAi stocks for FBgn0035945 available for purchase.
VDRC has 3 RNAi stocks for FBgn0035945 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	96 ± 4	4 of 4	0.60	Down
Head	66 ± 3	4 of 4	0.40	Down
Eye	40 ± 3	4 of 4	0.27	Down
Thoracicoabdominal ganglion	76 ± 2	4 of 4	0.50	Down
Salivary gland	72 ± 7	4 of 4	0.49	Down
Crop	96 ± 5	4 of 4	0.60	Down
Midgut	63 ± 2	4 of 4	0.40	Down
Tubule	37 ± 2	4 of 4	0.30	Down
Hindgut	69 ± 2	4 of 4	0.50	Down
Heart	65 ± 1	4 of 4	0.44	Down
Fat body	65 ± 6	4 of 4	0.44	Down
Ovary	297 ± 10	4 of 4	2.00	Up
Testis	86 ± 4	4 of 4	0.60	Down
Male accessory glands	45 ± 2	4 of 4	0.30	Down
Virgin spermatheca	47 ± 1	4 of 4	0.32	Down
Mated spermatheca	51 ± 5	4 of 4	0.35	Down
Adult carcass	75 ± 3	4 of 4	0.50	Down
Larval CNS	132 ± 11	4 of 4	0.89	None
Larval Salivary gland	116 ± 10	4 of 4	0.78	Down
Larval midgut	73 ± 4	4 of 4	0.49	Down
Larval tubule	67 ± 2	4 of 4	0.50	Down
Larval hindgut	92 ± 2	4 of 4	0.62	Down
Larval fat body	158 ± 2	4 of 4	1.10	Up
Larval trachea	100 ± 10	4 of 4	0.67	Down
Larval carcass	109 ± 6	4 of 4	0.74	Down
S2 cells (growing)	282 ± 8	4 of 4	1.90	Up
Whole fly	148 ± 3	4 of 4

Looking for FBgn0035945. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720