FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035960 through 18771 annotations produced 1 hits

(CG4942):

Annotation Number : CG4942
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035960
Gbrowse : chr3L:9066227-9067574 (+) // 100.0 //
Probeset : 1641092_at
Accessions : protein= NP_648286;, nucleotide= NM_140029;
Pathway : 0005743 // mitochondrial inner membrane // inferred from sequence or structural similarity /// 0016020 // membrane // in
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0035960.
VDRC has 1 RNAi stocks for FBgn0035960 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	42 ± 0	4 of 4	1.00	None
Head	24 ± 3	4 of 4	0.60	Down
Eye	19 ± 2	4 of 4	0.48	Down
Thoracicoabdominal ganglion	59 ± 2	4 of 4	1.50	Up
Salivary gland	50 ± 5	4 of 4	1.23	None
Crop	39 ± 5	4 of 4	1.00	None
Midgut	31 ± 3	4 of 4	0.80	Down
Tubule	33 ± 1	4 of 4	0.80	Down
Hindgut	56 ± 2	4 of 4	1.40	Up
Heart	35 ± 1	4 of 4	0.86	Down
Fat body	45 ± 3	4 of 4	1.10	None
Ovary	77 ± 1	4 of 4	1.90	Up
Testis	40 ± 2	4 of 4	1.00	None
Male accessory glands	40 ± 3	4 of 4	1.00	None
Virgin spermatheca	43 ± 3	4 of 4	1.06	None
Mated spermatheca	46 ± 2	4 of 4	1.14	None
Adult carcass	33 ± 2	4 of 4	0.80	None
Larval CNS	44 ± 3	4 of 4	1.09	None
Larval Salivary gland	56 ± 2	4 of 4	1.36	Up
Larval midgut	52 ± 2	4 of 4	1.27	Up
Larval tubule	31 ± 3	4 of 4	0.80	None
Larval hindgut	48 ± 2	4 of 4	1.17	Up
Larval fat body	17 ± 2	2 of 4	0.40	Down
Larval trachea	25 ± 2	4 of 4	0.61	Down
Larval carcass	36 ± 1	4 of 4	0.88	None
S2 cells (growing)	37 ± 1	4 of 4	0.92	None
Whole fly	41 ± 1	4 of 4

Looking for FBgn0035960. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720