FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035976 through 18771 annotations produced 1 hits

totem (PGRP-LC):

Annotation Number : CG4432
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035976
Gbrowse : chr3L:9333553-9341434 (+) // 100.0 //
Probeset : 1641723_a_at
Accessions : protein= NP_001163396; /// NP_001163397; /// NP_001163398; /// NP_648298; /// NP_729468; /// NP_996030;, nucleotide= NM_001169925; /// NM_001169926; /// NM_001169927; /// NM_140041; /// NM_168324; /// NM_206308;
Pathway : 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electr
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0035976.
BDGP gene expression has embryonic in situ data for PGRP-LC: 13 pix of staining in 5 body parts.
TRiP has 1 RNAi stocks for FBgn0035976 available for purchase.
VDRC has 2 RNAi stocks for FBgn0035976 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	17 ± 1	4 of 4	0.20	Down
Head	91 ± 6	4 of 4	1.20	None
Eye	31 ± 3	4 of 4	0.41	Down
Thoracicoabdominal ganglion	15 ± 2	3 of 4	0.20	Down
Salivary gland	132 ± 2	4 of 4	1.72	Up
Crop	229 ± 8	4 of 4	3.00	Up
Midgut	75 ± 4	4 of 4	1.00	None
Tubule	88 ± 7	4 of 4	1.10	None
Hindgut	240 ± 9	4 of 4	3.10	Up
Heart	236 ± 5	4 of 4	3.08	Up
Fat body	202 ± 38	4 of 4	2.63	Up
Ovary	54 ± 3	4 of 4	0.70	None
Testis	5 ± 0	1 of 4	0.10	Down
Male accessory glands	21 ± 3	2 of 4	0.30	Down
Virgin spermatheca	198 ± 9	4 of 4	2.58	Up
Mated spermatheca	160 ± 14	4 of 4	2.09	Up
Adult carcass	194 ± 11	4 of 4	2.50	Up
Larval CNS	4 ± 1	0 of 4	0.06	Down
Larval Salivary gland	185 ± 4	4 of 4	2.41	Up
Larval midgut	37 ± 1	4 of 4	0.49	Down
Larval tubule	39 ± 3	4 of 4	0.50	Down
Larval hindgut	150 ± 8	4 of 4	1.96	Up
Larval fat body	84 ± 13	4 of 4	1.10	None
Larval trachea	144 ± 35	4 of 4	1.88	Up
Larval carcass	119 ± 25	4 of 4	1.56	None
S2 cells (growing)	72 ± 6	4 of 4	0.95	None
Whole fly	76 ± 7	4 of 4

Looking for FBgn0035976. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720