Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0035985 through 18771 annotations produced 1 hits



CG3672 (Cpr67B):

Annotation Number : CG3672
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035985
Gbrowse : chr3L:9397894-9399280 (+) // 100.0 //
Probeset : 1635998_at
Accessions : protein= NP_648306;, nucleotide= NM_140049;
Interpro : 0005214 // structural constituent of chitin-based cuticle // inferred from sequence or structural similarity /// 0042302
FlyMine data for FBgn0035985.
VDRC has 2 RNAi stocks for FBgn0035985 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain20 ± 21 of 4 0.10Down
Head807 ± 364 of 4 3.80Up
Eye95 ± 274 of 4 0.45Down
Thoracicoabdominal ganglion46 ± 24 of 4 0.20Down
Salivary gland106 ± 44 of 4 0.50Down
Crop5892 ± 3514 of 427.60Up
Midgut208 ± 124 of 4 1.00None
Tubule15 ± 50 of 4 0.10Down
Hindgut2806 ± 874 of 413.10Up
Heart20 ± 23 of 4 0.10Down
Fat body36 ± 113 of 4 0.17Down
Ovary6 ± 10 of 4 0.00Down
Testis6 ± 10 of 4 0.00Down
Male accessory glands18 ± 20 of 4 0.10Down
Virgin spermatheca117 ± 84 of 4 0.55Down
Mated spermatheca177 ± 174 of 4 0.83None
Adult carcass551 ± 374 of 4 2.60Up
Larval CNS3 ± 30 of 4 0.02Down
Larval Salivary gland9 ± 50 of 4 0.05Down
Larval midgut9 ± 10 of 4 0.04Down
Larval tubule9 ± 10 of 4 0.00Down
Larval hindgut689 ± 174 of 4 3.23Up
Larval fat body11 ± 40 of 4 0.10Down
Larval trachea137 ± 524 of 4 0.64None
Larval carcass2954 ± 1104 of 413.82Up
S2 cells (growing)14 ± 20 of 4 0.07Down
Whole fly213 ± 164 of 4

Looking for FBgn0035985. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime