FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0035996 through 18771 annotations produced 1 hits

(CG3448):

Annotation Number : CG3448
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035996
Gbrowse : chr3L:9443641-9444658 (-) // 100.0 //
Probeset : 1626220_at
Accessions : protein= NP_648316;, nucleotide= NM_140059;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from electronic
FlyMine data for FBgn0035996.
VDRC has 2 RNAi stocks for FBgn0035996 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	30 ± 2	4 of 4	0.50	Down
Head	46 ± 5	4 of 4	0.80	None
Eye	39 ± 1	4 of 4	0.67	Down
Thoracicoabdominal ganglion	43 ± 1	4 of 4	0.70	Down
Salivary gland	70 ± 4	3 of 4	1.22	None
Crop	74 ± 3	4 of 4	1.30	Up
Midgut	61 ± 5	4 of 4	1.10	None
Tubule	40 ± 3	4 of 4	0.70	Down
Hindgut	59 ± 2	2 of 4	1.00	None
Heart	47 ± 5	4 of 4	0.82	None
Fat body	58 ± 6	0 of 4	1.01	None
Ovary	117 ± 3	4 of 4	2.00	Up
Testis	36 ± 3	4 of 4	0.60	Down
Male accessory glands	137 ± 3	4 of 4	2.40	Up
Virgin spermatheca	66 ± 10	3 of 4	1.14	None
Mated spermatheca	74 ± 1	4 of 4	1.28	Up
Adult carcass	39 ± 5	1 of 4	0.70	Down
Larval CNS	64 ± 8	4 of 4	1.12	None
Larval Salivary gland	105 ± 8	4 of 4	1.81	Up
Larval midgut	24 ± 1	0 of 4	0.41	Down
Larval tubule	79 ± 5	4 of 4	1.40	Up
Larval hindgut	45 ± 4	4 of 4	0.78	None
Larval fat body	102 ± 2	4 of 4	1.80	Up
Larval trachea	55 ± 6	4 of 4	0.96	None
Larval carcass	34 ± 5	2 of 4	0.59	Down
S2 cells (growing)	107 ± 3	4 of 4	1.84	Up
Whole fly	58 ± 4	4 of 4

Looking for FBgn0035996. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720