FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036032 through 18771 annotations produced 1 hits

(CG16711):

Annotation Number : CG16711
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036032
Gbrowse : chr3L:9697769-9702809 (+) // 100.0 //
Probeset : 1624565_a_at
Accessions : protein= NP_648347; /// NP_729532;, nucleotide= NM_140090; /// NM_168361;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036032.
BioGrid reports that CG16711 interacts with CG4619 .
VDRC has 4 RNAi stocks for FBgn0036032 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	131 ± 8	4 of 4	8.20	Up
Head	28 ± 1	4 of 4	1.80	Up
Eye	101 ± 7	4 of 4	6.38	Up
Thoracicoabdominal ganglion	78 ± 4	4 of 4	4.90	Up
Salivary gland	44 ± 4	4 of 4	2.79	Up
Crop	20 ± 3	4 of 4	1.30	None
Midgut	19 ± 2	2 of 4	1.20	None
Tubule	15 ± 0	2 of 4	1.00	None
Hindgut	15 ± 1	4 of 4	1.00	None
Heart	33 ± 1	4 of 4	2.13	Up
Fat body	23 ± 3	4 of 4	1.48	Up
Ovary	30 ± 2	4 of 4	1.90	Up
Testis	132 ± 3	4 of 4	8.40	Up
Male accessory glands	30 ± 4	4 of 4	1.90	Up
Virgin spermatheca	28 ± 3	4 of 4	1.79	Up
Mated spermatheca	29 ± 4	4 of 4	1.83	None
Adult carcass	17 ± 4	1 of 4	1.10	None
Larval CNS	49 ± 7	4 of 4	3.13	Up
Larval Salivary gland	39 ± 3	4 of 4	2.48	Up
Larval midgut	32 ± 2	4 of 4	2.01	Up
Larval tubule	14 ± 0	4 of 4	0.90	None
Larval hindgut	19 ± 2	4 of 4	1.23	None
Larval fat body	23 ± 6	3 of 4	1.50	None
Larval trachea	50 ± 4	4 of 4	3.15	Up
Larval carcass	19 ± 2	3 of 4	1.25	None
S2 cells (growing)	49 ± 1	4 of 4	3.11	Up
Whole fly	15 ± 1	4 of 4

Looking for FBgn0036032. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720