FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036035 through 18771 annotations produced 1 hits

(CG18178):

Annotation Number : CG18178
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036035
Gbrowse : chr3L:9710885-9712241 (-) // 100.0 //
Probeset : 1636192_at
Accessions : protein= NP_648350;, nucleotide= NM_140093;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from phy
FlyMine data for FBgn0036035.
BDGP gene expression has embryonic in situ data for CG18178: 4 pix of staining in 1 body parts.
BioGrid reports that CG18178 interacts with CG8580 .
TRiP has 1 RNAi stocks for FBgn0036035 available for purchase.
VDRC has 2 RNAi stocks for FBgn0036035 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	45 ± 2	4 of 4	0.30	Down
Head	59 ± 3	4 of 4	0.40	Down
Eye	58 ± 4	4 of 4	0.43	Down
Thoracicoabdominal ganglion	51 ± 3	4 of 4	0.40	Down
Salivary gland	57 ± 8	3 of 4	0.42	Down
Crop	123 ± 1	4 of 4	0.90	None
Midgut	45 ± 4	4 of 4	0.30	Down
Tubule	29 ± 3	3 of 4	0.20	Down
Hindgut	48 ± 4	4 of 4	0.40	Down
Heart	61 ± 1	4 of 4	0.45	Down
Fat body	81 ± 9	4 of 4	0.60	Down
Ovary	348 ± 12	4 of 4	2.60	Up
Testis	210 ± 5	4 of 4	1.60	Up
Male accessory glands	94 ± 5	4 of 4	0.70	Down
Virgin spermatheca	54 ± 1	4 of 4	0.40	Down
Mated spermatheca	85 ± 6	4 of 4	0.64	Down
Adult carcass	53 ± 2	4 of 4	0.40	Down
Larval CNS	173 ± 9	4 of 4	1.29	Up
Larval Salivary gland	89 ± 4	4 of 4	0.66	Down
Larval midgut	42 ± 3	4 of 4	0.32	Down
Larval tubule	30 ± 2	4 of 4	0.20	Down
Larval hindgut	57 ± 6	4 of 4	0.43	Down
Larval fat body	59 ± 13	4 of 4	0.40	Down
Larval trachea	147 ± 28	4 of 4	1.09	None
Larval carcass	99 ± 27	4 of 4	0.74	None
S2 cells (growing)	188 ± 6	4 of 4	1.40	Up
Whole fly	134 ± 4	4 of 4

Looking for FBgn0036035. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720