FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036044 through 18771 annotations produced 1 hits

(CG14168):

Annotation Number : CG14168
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036044
Gbrowse : chr3L:9781675-9790626 (-) // 100.0 //
Probeset : 1623867_at
Accessions : protein= NP_648358;, nucleotide= NM_140101;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0036044.
BioGrid reports that CG14168 interacts with CG15283 CG7224 CG9933 CG3979 CG4865 CG5053 CG6779 .
VDRC has 3 RNAi stocks for FBgn0036044 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	1.00	None
Head	6 ± 2	0 of 4	1.30	None
Eye	2 ± 0	0 of 4	0.41	None
Thoracicoabdominal ganglion	8 ± 1	0 of 4	1.60	None
Salivary gland	13 ± 2	0 of 4	2.53	None
Crop	8 ± 0	2 of 4	1.70	None
Midgut	4 ± 1	0 of 4	0.80	None
Tubule	8 ± 0	1 of 4	1.70	Up
Hindgut	3 ± 1	0 of 4	0.70	None
Heart	3 ± 2	0 of 4	0.64	None
Fat body	4 ± 2	1 of 4	0.90	None
Ovary	4 ± 1	0 of 4	0.80	None
Testis	4 ± 0	0 of 4	0.80	None
Male accessory glands	9 ± 1	0 of 4	1.90	None
Virgin spermatheca	5 ± 1	1 of 4	1.05	None
Mated spermatheca	7 ± 0	0 of 4	1.38	None
Adult carcass	18 ± 2	2 of 4	3.50	Up
Larval CNS	4 ± 1	1 of 4	0.91	None
Larval Salivary gland	6 ± 1	1 of 4	1.27	None
Larval midgut	5 ± 2	0 of 4	1.12	None
Larval tubule	3 ± 0	0 of 4	0.70	None
Larval hindgut	5 ± 1	0 of 4	0.98	None
Larval fat body	9 ± 3	1 of 4	1.80	None
Larval trachea	1 ± 1	0 of 4	0.31	None
Larval carcass	7 ± 0	1 of 4	1.37	None
S2 cells (growing)	4 ± 0	1 of 4	0.84	None
Whole fly	5 ± 1	0 of 4

Looking for FBgn0036044. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720