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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0036046 through 18771 annotations produced 1 hits


Drosophila insulin-like peptide 2 (Ilp2):

Annotation Number : CG8167
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036046
Gbrowse : chr3L:9792797-9793545 (+) // 100.0 //
Probeset : 1629220_at
Accessions : protein= NP_524012;, nucleotide= NM_079288;
Pathway : 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region /
Interpro : 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005158 // insulin receptor b
FlyMine data for FBgn0036046.
BDGP gene expression has embryonic in situ data for IRP: 4 pix of staining in 1 body parts.
BioGrid reports that CG8167 interacts with CG4319 CG18402 .
TRiP has 2 RNAi stocks for FBgn0036046 available for purchase.
VDRC has 3 RNAi stocks for FBgn0036046 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1607 ± 154 of 437.70Up
Head506 ± 314 of 411.90Up
Eye19 ± 62 of 4 0.45Down
Thoracicoabdominal ganglion18 ± 10 of 4 0.40Down
Salivary gland8 ± 40 of 4 0.19Down
Crop5 ± 10 of 4 0.10Down
Midgut3 ± 10 of 4 0.10Down
Tubule4 ± 00 of 4 0.10Down
Hindgut7 ± 00 of 4 0.20Down
Heart3 ± 10 of 4 0.07Down
Fat body11 ± 40 of 4 0.27Down
Ovary0 ± 00 of 4 0.00Down
Testis2 ± 10 of 4 0.10Down
Male accessory glands5 ± 00 of 4 0.10Down
Virgin spermatheca11 ± 10 of 4 0.27Down
Mated spermatheca13 ± 51 of 4 0.32Down
Adult carcass4 ± 10 of 4 0.10Down
Larval CNS638 ± 434 of 414.97Up
Larval Salivary gland7 ± 20 of 4 0.18Down
Larval midgut2 ± 00 of 4 0.05Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut2 ± 00 of 4 0.05Down
Larval fat body2 ± 00 of 4 0.10Down
Larval trachea3 ± 20 of 4 0.09Down
Larval carcass2 ± 10 of 4 0.06Down
S2 cells (growing)0 ± 00 of 4 0.02Down
Whole fly42 ± 34 of 4

Looking for FBgn0036046. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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