Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036063 through 18771 annotations produced 1 hits



(CG6674):

Annotation Number : CG6674
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036063
Gbrowse : chr3L:9964250-9965150 (-) // 100.0 //
Probeset : 1637423_at
Accessions : protein= NP_648377;, nucleotide= NM_140120;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036063.
BDGP gene expression has embryonic in situ data for CG6674: 4 pix of staining in 1 body parts.
BioGrid reports that CG6674 interacts with CG9776 .
VDRC has 3 RNAi stocks for FBgn0036063 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain75 ± 44 of 4 1.30Up
Head56 ± 04 of 4 0.90None
Eye64 ± 14 of 4 1.09None
Thoracicoabdominal ganglion67 ± 04 of 4 1.10Up
Salivary gland84 ± 22 of 4 1.43Up
Crop54 ± 44 of 4 0.90None
Midgut39 ± 54 of 4 0.70Down
Tubule31 ± 23 of 4 0.50Down
Hindgut61 ± 34 of 4 1.00None
Heart39 ± 44 of 4 0.67Down
Fat body47 ± 44 of 4 0.81Down
Ovary95 ± 44 of 4 1.60Up
Testis142 ± 94 of 4 2.40Up
Male accessory glands65 ± 84 of 4 1.10None
Virgin spermatheca36 ± 44 of 4 0.61Down
Mated spermatheca40 ± 24 of 4 0.68Down
Adult carcass53 ± 34 of 4 0.90None
Larval CNS78 ± 54 of 4 1.33Up
Larval Salivary gland45 ± 44 of 4 0.76Down
Larval midgut20 ± 13 of 4 0.35Down
Larval tubule48 ± 24 of 4 0.80Down
Larval hindgut42 ± 14 of 4 0.71Down
Larval fat body54 ± 93 of 4 0.90None
Larval trachea34 ± 14 of 4 0.58Down
Larval carcass41 ± 14 of 4 0.70Down
S2 cells (growing)58 ± 14 of 4 0.99None
Whole fly59 ± 24 of 4

Looking for FBgn0036063. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime