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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036078 through 18771 annotations produced 1 hits



Odorant receptor 67c (Or67c):

Annotation Number : CG14156
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036078
Gbrowse : chr3L:10236419-10237806 (-) // 100.0 //
Probeset : 1638525_at
Accessions : protein= NP_524018;, nucleotide= NM_079294;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0036078.
BioGrid reports that CG14156 interacts with CG4003 .
VDRC has 2 RNAi stocks for FBgn0036078 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 00 of 4 2.90None
Head6 02 of 4 5.20Up
Eye3 00 of 4 2.45Up
Thoracicoabdominal ganglion2 10 of 4 1.90None
Salivary gland9 00 of 4 7.71Up
Crop3 00 of 4 2.80None
Midgut2 00 of 4 1.70None
Tubule1 00 of 4 1.40None
Hindgut2 00 of 4 1.80None
Heart3 10 of 4 2.76None
Fat body8 12 of 4 6.69Up
Ovary3 01 of 4 2.60Up
Testis1 01 of 4 1.30None
Male accessory glands6 10 of 4 5.60None
Virgin spermatheca3 00 of 4 3.12Up
Mated spermatheca1 00 of 4 1.31None
Adult carcass4 00 of 4 3.60Up
Larval CNS3 01 of 4 2.57Up
Larval Salivary gland1 00 of 4 1.04None
Larval midgut2 00 of 4 1.71None
Larval tubule3 00 of 4 2.80Up
Larval hindgut2 10 of 4 2.37None
Larval fat body5 11 of 4 4.70None
Larval trachea2 10 of 4 2.31None
Larval carcass3 10 of 4 2.96None
S2 cells (growing)3 10 of 4 3.02None
Whole fly1 00 of 4

Looking for FBgn0036078. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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