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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036080 through 18771 annotations produced 1 hits



Or67d (Or67d):

Annotation Number : CG14157
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036080
Gbrowse : chr3L:10266303-10267724 (+) // 100.0 //
Probeset : 1634394_at
Accessions : protein= NP_648390;, nucleotide= NM_140133;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0036080.
TRiP has 1 RNAi stocks for FBgn0036080 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 02 of 4 1.70None
Head13 14 of 4 3.80Up
Eye7 12 of 4 2.03Up
Thoracicoabdominal ganglion7 02 of 4 2.10Up
Salivary gland9 40 of 4 2.63None
Crop3 10 of 4 0.90None
Midgut5 20 of 4 1.60None
Tubule5 10 of 4 1.60None
Hindgut4 10 of 4 1.20None
Heart4 01 of 4 1.12None
Fat body6 32 of 4 1.66None
Ovary3 01 of 4 1.00None
Testis2 12 of 4 0.80None
Male accessory glands4 10 of 4 1.30None
Virgin spermatheca8 14 of 4 2.25Up
Mated spermatheca6 12 of 4 1.69None
Adult carcass3 10 of 4 1.10None
Larval CNS11 24 of 4 3.17Up
Larval Salivary gland4 00 of 4 1.10None
Larval midgut7 00 of 4 1.95Up
Larval tubule6 11 of 4 1.70None
Larval hindgut3 00 of 4 1.08None
Larval fat body4 20 of 4 1.30None
Larval trachea3 32 of 4 0.84None
Larval carcass3 00 of 4 1.10None
S2 cells (growing)3 01 of 4 0.99None
Whole fly3 00 of 4

Looking for FBgn0036080. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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