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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036093 through 18771 annotations produced 1 hits



(CG14154):

Annotation Number : CG14154
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036093
Gbrowse : chr3L:10635015-10636014 (+) // 100.0 //
Probeset : 1638800_a_at
Accessions : protein= NP_648403; /// NP_729622;, nucleotide= NM_140146; /// NM_168418;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036093.
BioGrid reports that CG14154 interacts with CG7809 .
VDRC has 3 RNAi stocks for FBgn0036093 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.00Down
Head0 ± 00 of 4 0.00Down
Eye4 ± 11 of 4 0.08Down
Thoracicoabdominal ganglion0 ± 00 of 4 0.00Down
Salivary gland5 ± 20 of 4 0.10Down
Crop1 ± 00 of 4 0.00Down
Midgut0 ± 00 of 4 0.00Down
Tubule3 ± 00 of 4 0.10Down
Hindgut0 ± 00 of 4 0.00Down
Heart4 ± 10 of 4 0.07Down
Fat body1 ± 10 of 4 0.03Down
Ovary1 ± 00 of 4 0.00Down
Testis810 ± 264 of 413.90Up
Male accessory glands2 ± 10 of 4 0.00Down
Virgin spermatheca2 ± 00 of 4 0.03Down
Mated spermatheca1 ± 00 of 4 0.03Down
Adult carcass3 ± 10 of 4 0.10Down
Larval CNS3 ± 10 of 4 0.07Down
Larval Salivary gland10 ± 10 of 4 0.18Down
Larval midgut2 ± 10 of 4 0.04Down
Larval tubule0 ± 00 of 4 0.00Down
Larval hindgut1 ± 00 of 4 0.03Down
Larval fat body73 ± 483 of 4 1.30None
Larval trachea5 ± 42 of 4 0.10Down
Larval carcass1 ± 00 of 4 0.03Down
S2 cells (growing)1 ± 00 of 4 0.03Down
Whole fly58 ± 34 of 4

Looking for FBgn0036093. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime