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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036102 through 18771 annotations produced 1 hits



(CG12523):

Annotation Number : CG12523
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036102
Gbrowse : chr3L:10794291-10795217 (+) // 100.0 //
Probeset : 1638420_at
Accessions : protein= NP_648411;, nucleotide= NM_140154;
FlyMine data for FBgn0036102.
BDGP gene expression has embryonic in situ data for CG12523: 6 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0036102 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 12 of 4 0.90None
Head12 ± 14 of 4 1.40None
Eye12 ± 13 of 4 1.43None
Thoracicoabdominal ganglion6 ± 00 of 4 0.80None
Salivary gland20 ± 70 of 4 2.40None
Crop9 ± 12 of 4 1.10None
Midgut11 ± 12 of 4 1.30None
Tubule9 ± 02 of 4 1.10None
Hindgut8 ± 12 of 4 1.00None
Heart6 ± 01 of 4 0.72None
Fat body16 ± 64 of 4 1.84None
Ovary4 ± 01 of 4 0.50None
Testis7 ± 12 of 4 0.90None
Male accessory glands11 ± 11 of 4 1.30None
Virgin spermatheca20 ± 14 of 4 2.40Up
Mated spermatheca22 ± 54 of 4 2.60None
Adult carcass13 ± 22 of 4 1.50None
Larval CNS13 ± 34 of 4 1.56None
Larval Salivary gland6 ± 20 of 4 0.73None
Larval midgut9 ± 00 of 4 1.07None
Larval tubule9 ± 03 of 4 1.10None
Larval hindgut8 ± 14 of 4 1.02None
Larval fat body12 ± 24 of 4 1.50None
Larval trachea8 ± 23 of 4 0.93None
Larval carcass10 ± 04 of 4 1.20None
S2 cells (growing)9 ± 14 of 4 1.06None
Whole fly8 ± 12 of 4

Looking for FBgn0036102. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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