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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036112 through 18771 annotations produced 1 hits



(CG14147):

Annotation Number : CG14147
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036112
Gbrowse : chr3L:10965753-10966582 (+) // 100.0 //
Probeset : 1637765_at
Accessions : protein= NP_648422;, nucleotide= NM_140165;
FlyMine data for FBgn0036112.
BioGrid reports that CG14147 interacts with CG17377 CG4216 .
VDRC has 3 RNAi stocks for FBgn0036112 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 10 of 4 0.60None
Head7 21 of 4 0.90None
Eye3 11 of 4 0.45None
Thoracicoabdominal ganglion10 11 of 4 1.30None
Salivary gland12 30 of 4 1.43None
Crop12 31 of 4 1.50None
Midgut12 20 of 4 1.50None
Tubule8 01 of 4 1.00None
Hindgut13 01 of 4 1.60Up
Heart5 10 of 4 0.64None
Fat body15 51 of 4 1.81None
Ovary7 11 of 4 0.90None
Testis5 10 of 4 0.60None
Male accessory glands20 31 of 4 2.50Up
Virgin spermatheca8 00 of 4 0.99None
Mated spermatheca10 11 of 4 1.30None
Adult carcass21 41 of 4 2.50None
Larval CNS6 20 of 4 0.79None
Larval Salivary gland15 30 of 4 1.86None
Larval midgut12 30 of 4 1.49None
Larval tubule13 03 of 4 1.60Up
Larval hindgut16 22 of 4 2.01Up
Larval fat body12 11 of 4 1.50None
Larval trachea11 23 of 4 1.40None
Larval carcass10 10 of 4 1.19None
S2 cells (growing)11 21 of 4 1.32None
Whole fly8 11 of 4

Looking for FBgn0036112. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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